Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g01444 ATGCCGCAAACGGGTCCCGCCGGAGAACTCATCCGCGGAGGATCCGTTGGCCGCACGGTGGTGGTGGGGGTGAAGATGGACTCCCCCAGCAGGGAATTGCTCACGTGGGCTTTGGTCAAAGCTGCTCACCCTGGTGACACCGTGGTTGCTCTGCATGTTCTTGGGAACCATGAAACTGGAGACGGGAAATCTTCGCTGCTTTCGCTTGTCAAGGCGTTTGACTCTGTTCTTGCCGTTTATGAAGGATTTTGCAACTTGAAACAGGTCGACCTCAAGCTCAAAATTTGCCGTGGTTCATCGGTGAAGAAAATTTTGGTTCGAGAAGCAAATGGTTATTCCGCAACTCATGTTGTGGTTGGAACAACTCATGGTCTGCATAGAATCCGGTCATCTGCCTTTGTAGCTAAATACTGTGCTAAAAAGTTGTCCAAGGATTGTTGTATTCTCGCTGTTAACAATGGGAAAGTTGCGTTCAAGCGTGACAGCTCGCCACCAAGTTTTGCCGACTTACAAGGGATTGATCGTCAACACCGAAATGGTTTGATCGGTTCGATTCATTGGATACTCAGTAAGAATACTAAAGTTCTAAGTGATGACAATTCAGGGACGGAGGCTGATGCGAAGAAACCTGGCCAAATTTCAGATCACAGTTTAGCCAAGTTTTTTCTGGATTCTACAGAAACTGATAGAAAACCAAGCTGTTCAATTTGTGGCACAACCCTGGCATTGCCAGACCCTTCTTGCCACCAATCTGCAGAAGGGCTTTCTGGTGATGATGGTAAAGAGAATTCCTTGGCTATAATACCTGTGCAAGTCCAACCCACTGTTGCAGAAAAAACGGAACTGAAACCTGGTTGGCCACTGCTACACCGTGGAATTTTATCGGACACACAATCTACTGATAGATCATTGATGCACCCCCAGATCTCCGTGGTCCAGTGGGCAATGAGGTTACCTTCTAGAAATATTTCATATGCAGCAGATGGCGATGAAAAGCCTGAAAGTTGTGATCAAGGTTTAGATCAACCCGCGGCTTTAGATAGGGAAAGTGGTGCTCTTGTTCCGGTAGATTCTGAAATAGGGACTGCTTCTTCGCCAGAAGGCAATTCGAGAAACATTCCCAAAGAATTGGAAGGCCTTCATGAGAAGTACTCGTCAACTTGTAGATTGTTTGAGTACCAAGATCTCGTATCTGCCACATCAAATTTCTTACCGGAAAACTTTATTGGGAAAGGAGGAAGTAGTCAGGTTTATAGAGGCTGCCTTCCTGATGGCAAGGAACTTGCCGTCAAGATTCTAAAGCCTTCTGAAGATGTATTGAGGGAATTTATTCTGGAAATTGAAATCATCACTACCTTGCATCACAAAAACGTAATTTCCCTCCTGGGATTCTGCTTTGAGAATGACAAATTTCTTCTGGTTTATGATCTCTTATCAAGAGGAAGCCTTGAAGAGAACCTTCACGGTAATAAGAAAAATTCACTTGCGTTTGGTTGGTCCGAGAGATACAAGGTAGCAGTGGGAATTGCTGAGGCTTTAGATTATCTGCATTCTAAAGATGATCAACCCGTGATCCATCGAGATGTAAAATCATCAAATGTGTTATTATCAGAGGATTTTGAACCCCAGCTCTCTGATTTTGGACTGGCAAAATGGGCATCAACCTCGTCACCACATATAACCTGCACAGATGTTGCTGGAACCTTCGGTTACATGGCTCCTGAATACTTCATGTACGGCAAAGTAAATGATAAGATTGATGTCTATGCATTTGGTGTTGTGCTCCTAGAACTTCTTTCAGGGAGAAGGCCCATAAACCGTGATTATCCAAAAGGCCAAGAGAGTCTTGTCATGTGGGCAAGTCCAATTCTAAACAGTGGAAAGGTGTTACAATTGTTAGATCCTGGTTTGGGTGATAACTATGATCATAAGGAGATGGAAAAGATGGTCTTGGCAGCCACACTGTGTATCAAACGTGCTCCAAGGGCTAGGCCTCAAATGAACCTTATCTTAAAGCTTCTTCAAGGTGACACTGAAACAATGAAGTGGGCAAGGTTAGAAGTCAATAATGCTTTGGATGCAGCAGAAACGCTTGACGATGAAGCGTGTCCACCTAGTAATAATCTACAGTCACATATAAATCTTGCACTACGTGATGTGGTGGATGATTCACTCTCCATATGCAGTGTTGAGCAAGGTTTCACATTGGAGGACTACTTGAGAGGGCGGTGCAGCCGTGCATCAAGCTTTGACTGA 2256 0.4459 MPQTGPAGELIRGGSVGRTVVVGVKMDSPSRELLTWALVKAAHPGDTVVALHVLGNHETGDGKSSLLSLVKAFDSVLAVYEGFCNLKQVDLKLKICRGSSVKKILVREANGYSATHVVVGTTHGLHRIRSSAFVAKYCAKKLSKDCCILAVNNGKVAFKRDSSPPSFADLQGIDRQHRNGLIGSIHWILSKNTKVLSDDNSGTEADAKKPGQISDHSLAKFFLDSTETDRKPSCSICGTTLALPDPSCHQSAEGLSGDDGKENSLAIIPVQVQPTVAEKTELKPGWPLLHRGILSDTQSTDRSLMHPQISVVQWAMRLPSRNISYAADGDEKPESCDQGLDQPAALDRESGALVPVDSEIGTASSPEGNSRNIPKELEGLHEKYSSTCRLFEYQDLVSATSNFLPENFIGKGGSSQVYRGCLPDGKELAVKILKPSEDVLREFILEIEIITTLHHKNVISLLGFCFENDKFLLVYDLLSRGSLEENLHGNKKNSLAFGWSERYKVAVGIAEALDYLHSKDDQPVIHRDVKSSNVLLSEDFEPQLSDFGLAKWASTSSPHITCTDVAGTFGYMAPEYFMYGKVNDKIDVYAFGVVLLELLSGRRPINRDYPKGQESLVMWASPILNSGKVLQLLDPGLGDNYDHKEMEKMVLAATLCIKRAPRARPQMNLILKLLQGDTETMKWARLEVNNALDAAETLDDEACPPSNNLQSHINLALRDVVDDSLSICSVEQGFTLEDYLRGRCSRASSFD* 752
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g01444 751 FunFam probable receptor-like serine/threonine-protein kinase At5g57670 372 477 - -
Lapu9g01444 751 FunFam probable receptor-like serine/threonine-protein kinase At5g57670 17 152 - -
Lapu9g01444 751 SMART serkin_6 403 674 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu9g01444 751 Gene3D Phosphorylase Kinase; domain 1 369 477 - -
Lapu9g01444 751 CDD USP_Like 19 151 - -
Lapu9g01444 751 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 18 128 - -
Lapu9g01444 751 ProSitePatterns Protein kinases ATP-binding region signature. 409 431 IPR017441 GO:0005524
Lapu9g01444 751 Pfam Universal stress protein family 18 146 IPR006016 -
Lapu9g01444 751 Gene3D Transferase(Phosphotransferase) domain 1 478 696 - -
Lapu9g01444 751 ProSiteProfiles Protein kinase domain profile. 403 681 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu9g01444 751 CDD STKc_IRAK 409 676 - -
Lapu9g01444 751 Pfam Protein kinase domain 407 631 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu9g01444 751 SUPERFAMILY Protein kinase-like (PK-like) 384 676 IPR011009 -
Lapu9g01444 751 Gene3D HUPs 17 152 IPR014729 -
Lapu9g01444 751 FunFam Putative receptor-like serine/threonine-protein kinase 478 690 - -
Lapu9g01444 751 PANTHER OS08G0249100 PROTEIN 73 682 IPR046958 -
Lapu9g01444 751 ProSitePatterns Serine/Threonine protein kinases active-site signature. 524 536 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g01444 Lapu-Chr9 28777200 28781153 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu9g01444 309 670 Trihelix Transcription Factor Family AT1G68690 39.402 1.81e-76 258
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Lapu9g01444 Pkinase 3.5e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g01444 - - pcin:129303222 1016.53