Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g01441 ATGCCTCCGCGGCGGTGCACGGCGTCTGCGGCAGCGGGGCAGACGGGGAGCAGCGACAGCGACTTGGATGAGTTCATCATGCGGTGCCTCTCCTGTGAGGAGCAATACGACGTGGACGACTCCGGAACCTGCAGGGAGTGCTACCAGGAGGCCAATGAGGCCGAGGAGGAGCTCCGCCTCGAGATCGACGACCTCAAGTCGAAGGTCTCCTTCCTCACACTCTCCTCTCCTTCTCTCAGTCCTTCTACCGCCGATATCGTCCTCGTTTCCGTCGACGACTCCGACACCGCTCCCATTCCCGCTCACAAGCACGTTCTGGTTAGTCGCTCTCCTGTTTTTAATGCAATGCTTGAGAATGATATGGAGGAAAGGCGGAGCGGCACCATCAAGATTGCTGACGTATCAAATGATACCCTTCGTGCTTTTGTTAACTATTTATACACTGCTGAGGCGTCCCTTGATAACCAAATGGCCTGTAACCTGTTGGTTTTGGGAGAAAAGTATCAGGTGAAGCATCTCAAGAAATATTGTGAGAAGTACTTGATAGCCAAAATGAATTGGAATAAAGCTATTGCAAACTATGCCTTTGCATATCAATACAATTGCAAACAATTACGAAGTGCGTCCCTGGCGGTGATCTTGGACAAAATGGATTTGCTCACTCAAAATGAATATTATGCGGAGCTAGTGGACACCAATCCTCGTCTTGTTGTGGAAATATATGAAACATATATTGGCAAGCAATTAAATACTGCAGGCAACTTTTAG 768 0.4909 MPPRRCTASAAAGQTGSSDSDLDEFIMRCLSCEEQYDVDDSGTCRECYQEANEAEEELRLEIDDLKSKVSFLTLSSPSLSPSTADIVLVSVDDSDTAPIPAHKHVLVSRSPVFNAMLENDMEERRSGTIKIADVSNDTLRAFVNYLYTAEASLDNQMACNLLVLGEKYQVKHLKKYCEKYLIAKMNWNKAIANYAFAYQYNCKQLRSASLAVILDKMDLLTQNEYYAELVDTNPRLVVEIYETYIGKQLNTAGNF* 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g01441 255 Pfam BTB/POZ domain 80 183 IPR000210 GO:0005515
Lapu9g01441 255 MobiDBLite consensus disorder prediction 1 20 - -
Lapu9g01441 255 CDD BTB_POZ_ZBTB_KLHL-like 84 168 - -
Lapu9g01441 255 Gene3D Potassium Channel Kv1.1; Chain A 52 186 IPR011333 -
Lapu9g01441 255 Gene3D - 187 254 - -
Lapu9g01441 255 ProSiteProfiles BTB domain profile. 84 155 IPR000210 GO:0005515
Lapu9g01441 255 SMART BTB_4 84 185 IPR000210 GO:0005515
Lapu9g01441 255 SUPERFAMILY POZ domain 79 182 IPR011333 -
Lapu9g01441 255 PANTHER SPECKLE-TYPE POZ PROTEIN 16 250 - -
Lapu9g01441 255 Coils Coil 48 68 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Lapu9g01441 BTB 4.7e-21 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g01441 K10523 - gmx:100794118 407.527
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu9g01441 9 28753544 28757849 Lapu9g01441 9 28753544 28757849 ECH