Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g01416 ATGTCATTAGTTAGGTCTGCTGATCTAGCTCCTACATCGTATAAAAATGCCAAGCTCTTCTCACTGAAGGGAACTGATGTTAGACCAGGCTTGTCCTCACAGATTTTTGGCGCTGATAAGCATAGGAGCATGTACACGACAGATTCTTACTCCAGCGAGAGTTATGAGAAGTACTTACATGACTCACAAACAGAAGAACTGATAGAACCATCTAATTCCAGCATCTCTGGAAGTTCAATTCCCCCTGATGTAGCATCTTCTTACCAGCTCACAGCCACTTCAGAAGCATCTATGGTTGCCAATAACACATTTGATTGTTCTTTCATATCTACAATGCATCATGATGATTATCAGTCCAACTTTGGATCAGATTTTATGGAGAATGGAAGCCTCGATTCCCGTGACAATGATGGTCTAATGAGTTTAAAACTACAGGCACTGGAGAGGGCATTGCTTGATGATAGTGAGGCTGAGGAGGAGGAGCTCGAAGAGGAAGACATATTTCAGGCTGTTCAAAGCATGGAAATTGATCCAGACATTTCTGAGTGGGCTGATTCCGTGCAGAATATGCTTCTCCATGATTCACCAAAGGAGTACTCTTCTTCAGATTCCAGCATCAGCAGCACCAAAGAAATATCACAAACTTCTCAGACCCCCAAACAGCTGCTTTATGAATGTGCTATCGCACTTTCAGAAGGAAACGAAGAGGAAGGATCGTCCATGATAAACAATCTCAGGCAGATGGTCTCAATTCAAGGAGAGCCTTCTCAAAGAATTGCAGCCTATATGGTTGAGGGACTTGCAGCTCGCCTGGCCGAATCCGGCAAAAGTATTTACAAAGCTCTGAGATGCAAGGAGCCTCCTTCTTCAGACCGTCTAGCAGCTATGCAGATACTGTTTGAGGTTTGCCCATGTTTCAAATTTGGATTTATTGCTGCTAACAATGCAATTACAGAAGCAGTGAAAGATGACATGAACATTCATATCATAGACTTTGACATCAATCAAGGAAGTCAGTACATCAATCTAATCCAAACACTTGCTTCAAGGTCAAGTAAGCCACCCCATGTTAGATTGACAGGGGTTGATGATCCTGAGTCTGTGCAGCGATCTGTTGGAGGCCTAAAGAACATAGGACAAAGGCTAGAAAAACTGGCAGAGGCACTTGGTTTACCATTTGAGTTCCGAGCAGTGGCATCAAGGACTTCCATTGTCACCCCATCAATGCTCAACTGTAGTCCTGGGGAAGCACTTGTGGTGAACTTTGCATTCCAGCTTCATCACATGCCTGATGAGAGTGTTTCAACAGTAAACGAACGGGACCAACTTCTTCGGTTGGTGAAGAGCTTGAATCCAAAGCTCGTGACAGTTGTGGAGCAAGATGTGAACACAAACACCACCCCCTTCTTGCCTAGATTTGTTGAAGCCTACAATTACTACTCTGCTGTGTTTGAGTCACTTGATGTCACTCTTCCTAGAGAAAGCCAGGACAGGATGAATGTTGAGAGGCAGTGCTTGGCCAGGGACATTGTCAATGTTGTTGCATGTGAGGGCGAGGATAGGATAGAACGGTATGAAGTGGCTGGCAAATGGAGAGCAAGGATGACAATGGCTGGTTTCACTTCATCTCTAATGAGCACAAATGTGACTGATGAAATCCGGAAACTCATTAAGGTGATGTATTGTGACAGGTACAAGATGAAGGAGGAAATGGGTGCACTTCATTTTGGTTGGGAAGACAAAAACTTGATCGTTGCTTCGGCATGGAAGCTACCAAGATAA 1782 0.4411 MSLVRSADLAPTSYKNAKLFSLKGTDVRPGLSSQIFGADKHRSMYTTDSYSSESYEKYLHDSQTEELIEPSNSSISGSSIPPDVASSYQLTATSEASMVANNTFDCSFISTMHHDDYQSNFGSDFMENGSLDSRDNDGLMSLKLQALERALLDDSEAEEEELEEEDIFQAVQSMEIDPDISEWADSVQNMLLHDSPKEYSSSDSSISSTKEISQTSQTPKQLLYECAIALSEGNEEEGSSMINNLRQMVSIQGEPSQRIAAYMVEGLAARLAESGKSIYKALRCKEPPSSDRLAAMQILFEVCPCFKFGFIAANNAITEAVKDDMNIHIIDFDINQGSQYINLIQTLASRSSKPPHVRLTGVDDPESVQRSVGGLKNIGQRLEKLAEALGLPFEFRAVASRTSIVTPSMLNCSPGEALVVNFAFQLHHMPDESVSTVNERDQLLRLVKSLNPKLVTVVEQDVNTNTTPFLPRFVEAYNYYSAVFESLDVTLPRESQDRMNVERQCLARDIVNVVACEGEDRIERYEVAGKWRARMTMAGFTSSLMSTNVTDEIRKLIKVMYCDRYKMKEEMGALHFGWEDKNLIVASAWKLPR* 594
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g01416 593 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 194 585 IPR005202 -
Lapu9g01416 593 Coils Coil 145 165 - -
Lapu9g01416 593 MobiDBLite consensus disorder prediction 195 214 - -
Lapu9g01416 593 Pfam GRAS domain family 220 590 IPR005202 -
Lapu9g01416 593 ProSiteProfiles GRAS family profile. 210 590 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g01416 Lapu-Chr9 28424962 28428767 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu9g01416 1 590 GRAS Transcription Factor Family AT1G21450 60.403 0.0 681
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Lapu9g01416 GRAS 1.6e-135 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g01416 - - gmx:100788103 1016.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu9g01416 9 28424962 28428767 Lapu9g01416 9 28424962 28428767 ECH