Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g01407 ATGAAAGGGTGTTGGTTAGTTGGGGTCTTGATTGCGGTGGGGTGTACCTGCTTGTTGGGCACTGTTGGGGTAGAAGGGTACCCTTCTGAGGATCTGATAGAGAGACTGCCTGGCCAACCTAATGTTGGGTTCAAGCAATATGCAGGGAATGTGGATGTAGATGTCAAGCATGGGAGAAGCCTCTTCTACTATTTTGTGGAGGCTGAGAATGACCATGACAAGAAACCCCTCACTCTTTGGCTCAATGGAGGCCCAGGATGTTCCTCCGTTGGAGGTGGTGCCTTTACCGAATTGGGTCCCTTTTATCCCAAAGGTGATGGACGTGGTCTTCGAAGAAATTCAATGTCTTGGAATAGAGCATCCAACCTCCTTTTCTTGGAGTCCCCAGCTGGAGTTGGTTGGTCATACTCAAACACAACTTCAGATTACAACTCTGGAGATGCATCCACAGCCAATGATACACTTCTGTTCATGCTGAAATGGTACAAGAAGTTTCCTTCCTACAGATCAAGGGAGCTGTTTCTTACTGGAGAAAGCTATGCAGGACATTATATACCACAGTTAGCTAATGTTCTTTTGGACCACAATGCTCGTTCAAATGGTTTCAAATTCAATATTAAAGGAGTTGCTATTGGAAACCCACTTCTGAAACTCGATCGTGATGCACAAGCAACATATGAATTCTTCTGGTCACATGGACTGATTTCCGATGAAATTGGCCTTGCCATTACGAATGATTGCGATTTTGATGATTATGTCTTTGCAAGTACACACAATATGTCTAAATCATGCAACAATGCACTAAATGAGGCAAATGAGATTGTTGGCGATTATATAAACAACTATGATGTGATTCTGGATGTTTGTTATCCATCAATAGTTGAACAAGAACTGAGATTGAAAAAGATGGCTACTAAGATAAGCGTAGGTGTAGATGTATGTATGACTTATGAAAGAGGTTTTTATTTCAACCTCCCCGAGGTTCAGAAGGCTCTCCATGCAAACCGTACTAATCTTCCGTACGAATGGTCCATGTGCAGTGGTGTCTTAAATTATAGCGACACTGATCCTGATATAGACATTCTCCCAGTTCTCAAAAGGATAGTTCAAAACCACATTCCAGTATGGGTTTTCAGTGGAGACCAAGATTCTGTTGTGCCATTACTAGGTTCTCGAACACTGATTCGTGAACTAGCTCACGAGCTGAAGTTCAAGATTACAGTCCCATATGGAGCATGGTTTCACCAAGGGCAGGTTGGAGGTTGGGTAACAGAGTATGGAAATTTGTTGACTTTTGCGACTGTAAGAGGAGCTGCTCACATGGTACCCTTTGCACAACCTTCAAGAGCACTCCATCTCTTTAGCTCATTTGTGCGTGGAAGGAGATTGCCAAACACAACACACCCTTCAATTTTCTAA 1419 0.4306 MKGCWLVGVLIAVGCTCLLGTVGVEGYPSEDLIERLPGQPNVGFKQYAGNVDVDVKHGRSLFYYFVEAENDHDKKPLTLWLNGGPGCSSVGGGAFTELGPFYPKGDGRGLRRNSMSWNRASNLLFLESPAGVGWSYSNTTSDYNSGDASTANDTLLFMLKWYKKFPSYRSRELFLTGESYAGHYIPQLANVLLDHNARSNGFKFNIKGVAIGNPLLKLDRDAQATYEFFWSHGLISDEIGLAITNDCDFDDYVFASTHNMSKSCNNALNEANEIVGDYINNYDVILDVCYPSIVEQELRLKKMATKISVGVDVCMTYERGFYFNLPEVQKALHANRTNLPYEWSMCSGVLNYSDTDPDIDILPVLKRIVQNHIPVWVFSGDQDSVVPLLGSRTLIRELAHELKFKITVPYGAWFHQGQVGGWVTEYGNLLTFATVRGAAHMVPFAQPSRALHLFSSFVRGRRLPNTTHPSIF* 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g01407 472 PRINTS Carboxypeptidase C serine protease (S10) family signature 161 186 IPR001563 GO:0004185|GO:0006508
Lapu9g01407 472 PRINTS Carboxypeptidase C serine protease (S10) family signature 430 443 IPR001563 GO:0004185|GO:0006508
Lapu9g01407 472 PRINTS Carboxypeptidase C serine protease (S10) family signature 126 136 IPR001563 GO:0004185|GO:0006508
Lapu9g01407 472 PRINTS Carboxypeptidase C serine protease (S10) family signature 113 125 IPR001563 GO:0004185|GO:0006508
Lapu9g01407 472 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 33 447 IPR001563 GO:0004185|GO:0006508
Lapu9g01407 472 FunFam Carboxypeptidase 27 291 - -
Lapu9g01407 472 ProSitePatterns Serine carboxypeptidases, serine active site. 175 182 IPR018202 GO:0004185
Lapu9g01407 472 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 15 - -
Lapu9g01407 472 Pfam Serine carboxypeptidase 38 460 IPR001563 GO:0004185|GO:0006508
Lapu9g01407 472 Gene3D - 361 460 - -
Lapu9g01407 472 SUPERFAMILY alpha/beta-Hydrolases 34 463 IPR029058 -
Lapu9g01407 472 Gene3D - 314 350 - -
Lapu9g01407 472 Gene3D alpha/beta hydrolase 28 290 IPR029058 -
Lapu9g01407 472 FunFam Carboxypeptidase 361 460 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g01407 Lapu-Chr9 28295478 28298860 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu9g01407 321 463 Calmodulin-binding Proteins AT2G22960 25.342 5.91e-11 59.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g01407 K16297 - gmx:100815723 904.434
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu9g01407 9 28295478 28298860 Lapu9g01407 9 28295478 28298860 ECH