Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g01378 ATGGACAACATGGGAGATCCAAAGAGCATCGTACAAGAGCTATTACAAGGTTTGGAGTTGGCAAGGCAGCTCCAAGCGTATCTCCACACGCCTTCCTCGTCCCAAGAAACCCGTGACCTCATCCAGAAGATCATATCCACGTTTGAGAAGGCACTTGAAATGGTAAATTGGAAAGGGCCAGTGCCTGCGGGTGAGTCATCACAACCGCCGCTAGCAGCTGCAATCCCTGCAATCCGAATGTCAGACTCACCTATCAGCAGTAGTCCCCGAAGTGAAGACTCCGAGAGAGATTTGAAAGACCAAGACAACAATGCTTTCAAAAAAAGAAACACTTTGCCGAGATGGACGAAACAGATTCGGGTTACACCAGGAATGGGGGTGGAAGGGCCTCTTGATGATGGATATAGTTGGAGAAAATATGGCCAGAAAGACATCCTTGGAGCCATGTACCCCAGGGGCTATTACAGATGTACCCACAGAAATGTTCAAGGTTGCATGGCAACAAAGCAAGTGCAAAGATCTGATGAAGACCCTACGATTTTTGAAATCAATTACCGAGGAAAGCACACATGCTCGGTGGCCCACAACGTGGGTTCTTCTTCAATAATTCCACTGGAAAACCAAGAACCGAGTCTGAACAACACAATTCAGCAGCAGAATGTCTTGCAGAGCCTTGAGCAGCAACCAAATGATTTACTTTTGAGTCTCCGAGAAGGGTTGAGAGTCCAAACAGAGAACCTAGATTCCACTGACCAATCATTTGTTCCATTCCATTTCCCTTTATCAACAAACATAAAAAATGAAGGTCAAGTTTTCCCTCCCCATGTGCTGGAAAATTTTAGTTCTCCTTATATGTCACCTGCTACATCCGGAATAAGCTACTTTTCTGTGTCTCCAAGTGGGGTGAACAGTTTCGGAGGGAGCCCAAATTTGGCAACTTTTGATTCTCATATCAATGACTTGATCCCAGCTGCCACTTCAGCTCCAAACTCAGCAGCTGTTGGTTTAGAGTTTCCTTTCCACCAGTTTGAATTTGACGGTCAGAACTTCAGATTCGACAACCCATGA 1068 0.4569 MDNMGDPKSIVQELLQGLELARQLQAYLHTPSSSQETRDLIQKIISTFEKALEMVNWKGPVPAGESSQPPLAAAIPAIRMSDSPISSSPRSEDSERDLKDQDNNAFKKRNTLPRWTKQIRVTPGMGVEGPLDDGYSWRKYGQKDILGAMYPRGYYRCTHRNVQGCMATKQVQRSDEDPTIFEINYRGKHTCSVAHNVGSSSIIPLENQEPSLNNTIQQQNVLQSLEQQPNDLLLSLREGLRVQTENLDSTDQSFVPFHFPLSTNIKNEGQVFPPHVLENFSSPYMSPATSGISYFSVSPSGVNSFGGSPNLATFDSHINDLIPAATSAPNSAAVGLEFPFHQFEFDGQNFRFDNP* 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g01378 355 MobiDBLite consensus disorder prediction 79 111 - -
Lapu9g01378 355 Gene3D WRKY domain 124 194 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lapu9g01378 355 Pfam WRKY DNA -binding domain 132 191 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lapu9g01378 355 FunFam WRKY transcription factor 53 117 194 - -
Lapu9g01378 355 ProSiteProfiles WRKY domain profile. 126 194 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lapu9g01378 355 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 5 232 IPR044810 GO:0003700
Lapu9g01378 355 MobiDBLite consensus disorder prediction 89 107 - -
Lapu9g01378 355 SUPERFAMILY WRKY DNA-binding domain 130 193 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lapu9g01378 355 SMART WRKY_cls 131 193 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g01378 Lapu-Chr9 28009335 28010723 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu9g01378 8 271 WRKY Transcription Factor Family AT4G23810 37.762 1.14e-50 170
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lapu9g01378 WRKY 2.6e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g01378 - - gmx:100776906 560.066