Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g01370 TCCTCTCTCTCTCTCACGCCCTTATTTCTACGTCTTCTCTCTGTTCATTTTCTCCTCTCAGAGGTCACAACACACACCTATTTGCAAGAGAGTCACCAGCATCACTACATAATCTTGGAAAGTAGTCTCGTCTTTCAGCGTCGAAGAAGATTTCAATTAAATATGAACTATATATTTCTTCTCCTTGTTACTTTCAAGATCATCAAGAGGAAGTTAACACAGTTACAAGAGATTATGGGATTTCAAACATCACATAGCACAAAAAGAATGTCACAACCGATTTTCAGAGCAAAGGAGGATCCTGTTGATGTTCACGAAAACCCATTAATTCAAAGGACGACACTGAATTTGATTGATCATTCTCAAACCAATACCAAGTACATTTTGTCTGGTTATGATTCATGGGTGGTAACACACCCTTCGGCATTGAAGTCATTTGAAAGGTTGATGAAAGCTGCTGCAGGGAGGAGAATCATTGTTTTTTTGGATTACGATGGTACCTTATCCCCAATTGTAAATGATCCTGACCGTGCTTTTATGTCTGATGAGATGCGTGCAGCAGTATATGAGGTTGCTACGTATTTTCCAACAGCAATAATTAGTGGAAGAAGCAGAGATAAAGTAAAAGATTTTGTGAAGTTAAATAATTTATATTATGCTGGGAGTCATGGCATGGACATAATGGCACCATCAATGCCAGTTAGATCCTCTGAAGGCAGAACCGACACTGAAGTTCCCTTTCAACCAGCCAAGAAGTTTTTGCCAGCTATTCGAGAGATATTAAGAATACTAAAGGATGAAGTAAAGGAAATCAAAGGAGCAATGGTTGAGGATAACGGATTCTGCATCTCTGTACACTTCCGGCAGGTCCAACAAGAGGATTATGGTGTGTTGGAAGGGAAAGTGAAGTCTGTCCTTGAAAATCATCAGCAATTTTGCTTAACAGAGGGTAAAAAGGTTATGGAAATAAGGCCGTCTATAAAGTGGAACAAAGGAAATGCTGTAGAATATTTTCTTGACACATTAGGATTAAGCAGTTGCAATGATATCCTTCCTGTGTATATTGGCGATGATAGAACTGATGAAGATGCTTTTAAGGTCATACAGAGTAGAGAGCAAGGTTGTCCAATTATAGTGTCTTCAATTCCAAGAGAAACTAACGCTTTATACTCTTTGCGTGACCCATCTGAAGTACTAATCTTCTTGTCACGGTTGGCTAAATGGAGGAAAACCGCATACTAA 1242 0.3905 SSLSLTPLFLRLLSVHFLLSEVTTHTYLQESHQHHYIILESSLVFQRRRRFQLNMNYIFLLLVTFKIIKRKLTQLQEIMGFQTSHSTKRMSQPIFRAKEDPVDVHENPLIQRTTLNLIDHSQTNTKYILSGYDSWVVTHPSALKSFERLMKAAAGRRIIVFLDYDGTLSPIVNDPDRAFMSDEMRAAVYEVATYFPTAIISGRSRDKVKDFVKLNNLYYAGSHGMDIMAPSMPVRSSEGRTDTEVPFQPAKKFLPAIREILRILKDEVKEIKGAMVEDNGFCISVHFRQVQQEDYGVLEGKVKSVLENHQQFCLTEGKKVMEIRPSIKWNKGNAVEYFLDTLGLSSCNDILPVYIGDDRTDEDAFKVIQSREQGCPIIVSSIPRETNALYSLRDPSEVLIFLSRLAKWRKTAY* 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g01370 413 NCBIfam HAD-IIB family hydrolase 159 368 IPR006379 -
Lapu9g01370 413 Gene3D - 245 413 IPR023214 -
Lapu9g01370 413 Gene3D - 158 244 IPR023214 -
Lapu9g01370 413 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 91 411 IPR044651 GO:0004805|GO:0005992
Lapu9g01370 413 SUPERFAMILY HAD-like 159 409 IPR036412 -
Lapu9g01370 413 CDD HAD_TPP 160 398 - -
Lapu9g01370 413 FunFam Trehalose 6-phosphate phosphatase 255 413 - -
Lapu9g01370 413 FunFam Trehalose 6-phosphate phosphatase 158 244 - -
Lapu9g01370 413 Pfam Trehalose-phosphatase 161 396 IPR003337 GO:0003824|GO:0005992
Lapu9g01370 413 NCBIfam trehalose-phosphatase 155 407 IPR003337 GO:0003824|GO:0005992
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g01370 Lapu-Chr9 27903356 27911670 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu9g01370 156 406 Trehalose Biosynthesis Gene Families AT1G70290 26.592 8.62e-10 58.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g01370 K01087 - gmx:100819120 625.935