LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lapu9g01355	ATGGCGCTTTGTGGAACTTCACCGAACCCAGTTCCGGGGAGTAACAGCTTAGCGTATTCAGCTCAAAATTTGTCGACAAAACTTATTTTACCTGTTCCCCTGCGTTTTACTAGACAGTTCTCCAATCTAGCCAGGAAAAAGCGCAAGGGATTATGGTGCTCTTCATTAAGCAATGCTGCATCTGCATCTTCTAAGGAGTCACAGGAAGATGCTCCAAGTACATTTTCAGTTTGCACGGAGGAGGAACTAGATCATGTTATACGGTTCAAAATGTCAGACTTTAGGATTTTAGATTCAGTTAGCGTTGGTCTTGGTGGGCGGTCGGATGAGATAGTTTTTGAAGGCATGGTGAAGGATAGTAGTAGTTCTTTATATGACACAAGAGTTGTACTTCGACAGCTTTCTAGTGCTCAAGCTCAGCGTCGGGGGAAACGAGCAATAGAGGTTTTGAAGAAGCTGGTTCGGCGTAAACTTCTGTATCATTCTTACTCAATGCAAGTTCATGGTTACATCTCTTTGCCTGCAAGTGATGACAGTGATTCATTTATCCTGGTACATGGGTATCATGGCAGTTTTTCTTTGAGACACTGGCTTGAACGTTCAGATTGGCTTCCAACTTTAGAGGCTACTCTTGCACTGGATGAAGAGTCTGTTAGAAAGGTAGGAGAAGATACAACTGGAGGTCCTGCAGTTTCTAGGCAGTTGCGACTTATTCGAATATTGATGAGGGATCTTCTTATTGGGGTAAATTACCTGCATAGCCACGGTCTTGCGCATACTGAGCTGAGACTGGAAAATGTTCATATAAGTCCAGTAGACAGACATATCAAAGTGGGCATATTGGGTAATGCTGCTGACTTTTACAAGGATGGTTCGAAAGATAGCTCTTTGGACAACTTGGACAGGCGACAAATGATGATTGCATTTGACATGAGATGTATGGGCTTCATAATGGCTAAAATGGTAATGCGGGAACTTATGGATCCTTTGGTTTTTGCAAAGTTCAAATCATTCCTCACAAAGGGGTATGATCCTTCATGTCTACGAGAACTTATGTTGGAAGTCCTTGGCAGAAGTTCCCTGTGTGGAAATGCTGGATTACAAATACTTGATAGGAACGGGGGAGCTGGCTGGCACCTTTTATCTTTATTGCTTGCAACTAAACCTTCTCAAAGGATAAGTTGTTTGGATGCTCTGAGACACCCATTTCTATGTGGACCAAGATGGCGAGTAGTCTCATCAATGGACGTTATCAGATGGGGTCTGGGGTCTACTGCAATGCGTATTACTGAGGAGTACATCTATCGCGAGCCTCAGCGCAGCAGGCTTGCCCATTTCATTGACTTAATGGAGATGTTGAATCCCCATCCAAAGCCAAAGAACTGGCTGGACCTGCTTCCAGGTAAATGGCGTCTATTATACTGCACTGGGAAGCATGTAGGCCTGACCCTTCGCCAACCACCTCTCCGTGTACTTGTTGGCGAAGTGCATTTGACAGTGACAAGAGAATCAAAACTGAAAGCTAATCTTTCATTTGACTCTGACATTGGATTCTCTGTGATGATTGGTCAGGACTGGCCTCTTGACAAAGCTGGTAAGAGTGGAAGATTGCAGGTGAAATCTTCATTTACACTACGAGCCGGGAGACGGTTGTATCTGAATCAAGACAAGACCACAGAGAAGTTCTTCTTTGGCCCTTCCAGCAATGTGGACGCTTTAGCTCAGAAATTTAAGGGCGAGAAATGGAGAAAAATAATCCCTTTCAAGGAGTTCCCATCAAGTCTTCCGGCAGCCAAGCTTGCATCAGGTGATATTGATGTGACAATGAATCTTGATGATCCATTAAATAAAAACATTGATACTGCAAAAAGTGTTCTGCAAGAACTAAGAACACAAATTCCCCCAGAAGTGTTTGATTTGTCTAAGCTTGTGTGTGGAACTTATGTGGATTCAAGGCTGCTTATCCTACGAGGAGTTAATGGATCCGCGCTCCTATTTACAAGGTCTTTTGTGGACAGAAGCGGTTCTAGTTAG	2034	0.4366	MALCGTSPNPVPGSNSLAYSAQNLSTKLILPVPLRFTRQFSNLARKKRKGLWCSSLSNAASASSKESQEDAPSTFSVCTEEELDHVIRFKMSDFRILDSVSVGLGGRSDEIVFEGMVKDSSSSLYDTRVVLRQLSSAQAQRRGKRAIEVLKKLVRRKLLYHSYSMQVHGYISLPASDDSDSFILVHGYHGSFSLRHWLERSDWLPTLEATLALDEESVRKVGEDTTGGPAVSRQLRLIRILMRDLLIGVNYLHSHGLAHTELRLENVHISPVDRHIKVGILGNAADFYKDGSKDSSLDNLDRRQMMIAFDMRCMGFIMAKMVMRELMDPLVFAKFKSFLTKGYDPSCLRELMLEVLGRSSLCGNAGLQILDRNGGAGWHLLSLLLATKPSQRISCLDALRHPFLCGPRWRVVSSMDVIRWGLGSTAMRITEEYIYREPQRSRLAHFIDLMEMLNPHPKPKNWLDLLPGKWRLLYCTGKHVGLTLRQPPLRVLVGEVHLTVTRESKLKANLSFDSDIGFSVMIGQDWPLDKAGKSGRLQVKSSFTLRAGRRLYLNQDKTTEKFFFGPSSNVDALAQKFKGEKWRKIIPFKEFPSSLPAAKLASGDIDVTMNLDDPLNKNIDTAKSVLQELRTQIPPEVFDLSKLVCGTYVDSRLLILRGVNGSALLFTRSFVDRSGSS*	678

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lapu9g01355	677	Gene3D	Transferase(Phosphotransferase) domain 1	230	406	-	-
	Lapu9g01355	677	SMART	serkin_6	94	404	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lapu9g01355	677	SUPERFAMILY	Protein kinase-like (PK-like)	91	415	IPR011009	-
	Lapu9g01355	677	Pfam	PAP_fibrillin	439	665	IPR006843	-
	Lapu9g01355	677	ProSiteProfiles	Protein kinase domain profile.	94	404	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lapu9g01355	677	PANTHER	SERINE/THREONINE-PROTEIN KINASE STN8, CHLOROPLASTIC-RELATED	307	404	-	-

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	Group-Pl-4	Lapu9g01355		PAP_fibrillin	1.4e-08	No_clan

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Lapu9g01355	-		-	gmx:100809306	1189.48