Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g01353 ATGTATGCTGAAACTGGTCTTCTCTTCCCATATTTGCACAACCTCTCTCAAGAGCTTCACCAGCTTGAGGAGTACTGCAAAACCCAGAAGTACAATGCTTCAATGGATGACCTTGTTCAGTCTTCTGCCATGTCAGAGTATGATTTGGCAGCAGAGGGAGATCTGTTCAAAGCTCCTGAAACTATTATTGAAGAGCCAATCATGGACCTGGATCCCATGACAGCTGCCATCTCAATGATATCTTGTGGGGAGGATGTTTCCTCTCAGGGACTCAAATCCACTGATATTGATATTCTTCAAAATGATCAATTTCTGAGTGAGGTTTTCTATGAATGCAAAAAGGATCTCTTAGAAAAGGCAGCAATAGAGTCACCACTCTCTGAGATTCTGGAAATCAAGGTTCCTCTTCTGAACTTTGATGAAAACTCAATTCAAGAAAACAAACCACTTCCTGACATGCAGTTAGGAAAGAGTGTTAGCTCAGGAAGTTTAAGCTCGCTGGACTGGATTCGTGGAGCTGCTATGAAGCCTGCTTTCATTGATATCCCTGCAATGGATTTCGATGCAGTGTATGGCATGCGGAGATCATTTAGTGAAGGAGATATAAAGACTCTTGGTAACGGAAACATGAACATTGTCCAATCACCCCTTGAGAGGCCCTTTCTTATCAGCAACTGCACCAGTGAGGAACGCTTCCAAAAGCTCTCCAGATACAGGAATAAGAGGACAAAGAGGAACTTTGGGAGGAAAATCAAGTATGCATGCAGGAAGGCTCTTGCTGACAGTCAACCAAGGATCCGTGGAAGATTTGCAAGAACTGAAGAATGTGAGAGCAAGAGGGAATGA 846 0.4338 MYAETGLLFPYLHNLSQELHQLEEYCKTQKYNASMDDLVQSSAMSEYDLAAEGDLFKAPETIIEEPIMDLDPMTAAISMISCGEDVSSQGLKSTDIDILQNDQFLSEVFYECKKDLLEKAAIESPLSEILEIKVPLLNFDENSIQENKPLPDMQLGKSVSSGSLSSLDWIRGAAMKPAFIDIPAMDFDAVYGMRRSFSEGDIKTLGNGNMNIVQSPLERPFLISNCTSEERFQKLSRYRNKRTKRNFGRKIKYACRKALADSQPRIRGRFARTEECESKRE* 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g01353 281 ProSiteProfiles CCT domain profile. 231 273 IPR010402 GO:0005515
Lapu9g01353 281 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 145 275 IPR045281 GO:0009909
Lapu9g01353 281 Pfam CCT motif 231 273 IPR010402 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g01353 Lapu-Chr9 27683571 27688482 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu9g01353 227 278 C2C2-CO-like Transcription Factor Family AT5G57660 50.000 2.47e-09 55.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Lapu9g01353 CCT 3.3e-16 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g01353 - - gmx:100814332 502.286