Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g01342 ATGGGGAAGAAAGGAGGTAGCTGGTTCTCCTCCGTCAAAAAAGTTTTCAAATCCTCTTCCAAGGACTCACCGGTGCCGGAGAAGAAGAAAGACAACAAGAAGGAAGAGCAATGGCAGCATGAGGCGCCAGAGGAGGTGTCCTTGGAGCATTTTCCTGCGGAGAGTTCTCCAGATATTACCAATGAAGGGAGTACCGCGTCAACACCAGTGACTGAAGATAGAAGCCATGCTATTGCCTTTGCAGCAGCAACTGCTGCCGCGGCGGAAGCGGCGGTGGCAGCTGCTCAAGCAGCCGCTAGGGTGGTGAGATTAGCAGGTTATGGACGCCAATCGAAGGAAGAAAGAGCTGCAATACTCATTCAATCATACTACAGAGGTTACCTTGCTCGACGTGCATTGCGTGCTTTGAAGGGATTGGTGAGGCTGCAAGCGCTTGTGAGGGGACACAATGTGAGAAAGCAAGCGCAGATGACAATGCGATGCATGCATGCATTAGTCCGAGTACAGGCAAGAGTAAGAGCTCGAAGACTCCAGTTGACTCAAGAGAAGTTTCAGAGAAGAGTTGAGGAACAGGTCCAAAGAGATCTAGATGAACAAGAACAACCTAAGCTGCTTTTGAGCCCCATCAAAATGTTAGACGTGGATACATGGGACAGTAGGCGCCAAAGTAGCCAACAGATTAAGGAAAATGATTGGAGGAAACATGAAGCAGCAATGAAGAGGGAGAGAGCTCTTGCTTACGCTTTCAACTGCCAGCAGCAGAAGCAATACATGCAGATAGACCCAAATGGTGATGATATTGGAAGCTATAGCAAAGAGCGTGAAAGAGCCCAAATGGATTGGAACTGGTTGGAACGGTGGATGTTATCGCAATCACAAAACTCAAGGCACTTTGGGCCGCGGGAGAATCTTTATAGAACTCTTGCTACTGCCACTTCCACTACTGATGACATGTCTGAAGAAAAAACAGTTGAAATGGACATGGCTGCAACTCTGGACTCAGCTCATGCTAACATGGGTCTCATCCACCGAGAATCTTTTGACACAAGCCCAGTATCCAATAGGTACCACCAGCGCCACCACAGTGCAGGTGTACCTAGCTACATGGCCCCAACCCAGTCTGCAAAGGCCAAGGCTCGTAATCAAGGCCCGTTTAAGCACATGGGTTCACCTGGGCCTCACTGGAACTCGTCCACCAGGAAACCTGCTATAGGGCTGGGCTGTGACTCATCTAGCTCTGGTGGGCCCACTCCAGCTCATGGGTTTCCAAGAAGTCCAAGCCCAAAAATTAATGAAATTCGCCTCCAATCTAGACGGATTTCGGGTAGCAGCCCGGATAATGTTCACATTGAGGATTGGGCCCTTCCCCTTGGAACCAATGGTTGGACTTGA 1392 0.4957 MGKKGGSWFSSVKKVFKSSSKDSPVPEKKKDNKKEEQWQHEAPEEVSLEHFPAESSPDITNEGSTASTPVTEDRSHAIAFAAATAAAAEAAVAAAQAAARVVRLAGYGRQSKEERAAILIQSYYRGYLARRALRALKGLVRLQALVRGHNVRKQAQMTMRCMHALVRVQARVRARRLQLTQEKFQRRVEEQVQRDLDEQEQPKLLLSPIKMLDVDTWDSRRQSSQQIKENDWRKHEAAMKRERALAYAFNCQQQKQYMQIDPNGDDIGSYSKERERAQMDWNWLERWMLSQSQNSRHFGPRENLYRTLATATSTTDDMSEEKTVEMDMAATLDSAHANMGLIHRESFDTSPVSNRYHQRHHSAGVPSYMAPTQSAKAKARNQGPFKHMGSPGPHWNSSTRKPAIGLGCDSSSSGGPTPAHGFPRSPSPKINEIRLQSRRISGSSPDNVHIEDWALPLGTNGWT* 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g01342 463 MobiDBLite consensus disorder prediction 20 48 - -
Lapu9g01342 463 MobiDBLite consensus disorder prediction 57 71 - -
Lapu9g01342 463 SMART iq_5 112 134 IPR000048 GO:0005515
Lapu9g01342 463 SMART iq_5 135 156 IPR000048 GO:0005515
Lapu9g01342 463 ProSiteProfiles IQ motif profile. 137 164 IPR000048 GO:0005515
Lapu9g01342 463 Pfam Protein of unknown function (DUF4005) 350 383 IPR025064 -
Lapu9g01342 463 MobiDBLite consensus disorder prediction 392 418 - -
Lapu9g01342 463 MobiDBLite consensus disorder prediction 15 71 - -
Lapu9g01342 463 Pfam IQ calmodulin-binding motif 114 134 IPR000048 GO:0005515
Lapu9g01342 463 Pfam IQ calmodulin-binding motif 140 155 IPR000048 GO:0005515
Lapu9g01342 463 ProSiteProfiles IQ motif profile. 113 141 IPR000048 GO:0005515
Lapu9g01342 463 PANTHER IQ-DOMAIN 5-RELATED 1 412 - -
Lapu9g01342 463 Gene3D - 110 161 - -
Lapu9g01342 463 MobiDBLite consensus disorder prediction 430 444 - -
Lapu9g01342 463 MobiDBLite consensus disorder prediction 382 445 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g01342 Lapu-Chr9 27540363 27545200 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu9g01342 1 434 IQD Protein Family AT3G49260 50.976 4.69e-104 316
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g01342 - - gmx:100808965 713.375
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu9g01342 9 27540363 27545200 Lapu9g01342 9 27540363 27545200 ECH