Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g01336 ATGGACTTTGTCTCCGAACACGATTTCCCCAATCTTGAGATCATTCCTCATACCTTCAACTCATGCTTTTTCTCTGCTCAACTATACCCCGCAGACAAAATGATGGAGGTTTCACTTTCACCATTGGAGGGTTTTTCCGATCACGATTGGACACAGCAGTTGCCATATTCAAGCCAACAACTTTGCTTGAATGAGTTCCCAGATTTGGAAAACCTGGACCTCGATTTTAGCCTCCCACCCCTGGGTGAAGATTTGGAGGAGGTGGACCAGAAGCCCTTGAACATTATCGTTGTTCCCGAAGAGGGTCATTGCAATAGCGAGAAGGGTTTTGGGGATGCTTTATTGGCGATTGAAAATGGGTCTGCGATTTGTGTGAAGAAAGAGGTGCAGAATATTGAGCAGATGCTAGTGTCTAGTGCTAGTAGTAGCAGTAAGAAGAAGAGGCCATGTGCTTTGGAATTTGAGGAGATAAAGAAGCATTTTGATGTTCCCATTAATGAAGCTGCGAAGCAAATGAATGTGGGGTTAACCATGTTGAAGAGAAGGTGCAGGGAGCTCAACATCATGAGGTGGCCCCATAGGAAACTCAAGAGCTTGCAATTACTCATTGACAATGTTAAGGAATTGGGTTTGGCAGACGAGGTTCCCATGTTGGAGAAGCATAAAAGGTTGTTGGAAAAATTACCAGGACTGGAAATAAGTGCAAAAGCCAAGAAGCTGAGGCAAGCTTGTTTCAAAGCTAATTACAAGAGGAGAAGGTGTATGGGTATGGCACTCCAAGCTTGA 786 0.444 MDFVSEHDFPNLEIIPHTFNSCFFSAQLYPADKMMEVSLSPLEGFSDHDWTQQLPYSSQQLCLNEFPDLENLDLDFSLPPLGEDLEEVDQKPLNIIVVPEEGHCNSEKGFGDALLAIENGSAICVKKEVQNIEQMLVSSASSSSKKKRPCALEFEEIKKHFDVPINEAAKQMNVGLTMLKRRCRELNIMRWPHRKLKSLQLLIDNVKELGLADEVPMLEKHKRLLEKLPGLEISAKAKKLRQACFKANYKRRRCMGMALQA* 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g01336 261 ProSiteProfiles RWP-RK domain profile. 139 221 IPR003035 -
Lapu9g01336 261 PANTHER PROTEIN RKD4 115 257 IPR044607 GO:0003700
Lapu9g01336 261 Pfam RWP-RK domain 152 199 IPR003035 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g01336 Lapu-Chr9 27490239 27491553 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu9g01336 152 256 AtRKD Transcription Factor Family AT5G53040 62.857 1.30e-40 139
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF RWP-RK Lapu9g01336 RWP-RK 6.3e-23 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g01336 - - pvu:PHAVU_009G051600g 473.781
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu9g01336 9 27490239 27491553 Lapu9g01336 9 27490239 27491553 ECH