Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g01295 ATGGGTGAGTTTGGCATTCCACACACAAGAAAAAGAAGCAGCGGCAGCAACAGTAACAGTGGTAGTAGCCTTGTTGGGTTGGATGTGAAAGTGCAGAGCCCTGAAGCATTATTCCATAATAAGATGACGATGATGGCGCATCATAATCATCACCACCGTCCATTGTCATCACCCTTTGATAATGATTCCTGTGCTGGTGATGGTGATGGTCCCACGGCTTACATGTCTTTTACTAATCATATAAACCTTGTTAGTGGAGCTTCTGTTCTCCCTCCTGCTATTGATGGTGGCTGTGGTGCTCCTGCAGCTGTAAGAACTTTGCAGCCTTTTGACATTTCTCCTTATACTTCTCCCACCACCACCTCTTCTAGCTTCAAACCCTCAGCAGGTGGGATGGCGGCTTCGTTGGGGTTTCCTTTCACAAGTGCACAATGGAGGGAGCTTGAAAGACAAGCCATGATATACAAGTACATGATGGCTTCTGTTCCTGTTCCACCTGATCTCCTCATCCCTACTTCACTCACAACCTCTTCTCGCATGGATGGTGGTTTCAATCTGAGGTTGGCTAGTAGCACTGACCCGGAGCCAGGTAGGTGTAGGAGAACAGATGGTAAAAAATGGAGATGTTCAAGAGATGTGGCTCCTAACCACAAGTACTGCGAGCGCCATATGCATAGAGGGCGTCCCCGTTCAAGAAAGCCTGTGGAAGTTAACACCAACACCACCATTCCCCCTAGCATCAACAACAACAACAGCCACCAAATCAAGAGGCCTCGCCATGAGTGTAATCCTTTTTCTTCTATACCCGATGTTACTGGGGCTATTTCTAATCCCACATCTAGAAAACATGGATCTTCACCCCATTTTCTTGGCTCTTCCACCACTCCGCCATACCTTGAATCTCCTAACTCTCTTGCCAACTTTGGTCTCAAAACTGCAAATCTTGACACCATGACTTCTGTGCCTGCGAACAAGGAGTCCAGGGGTTTGGACTGGATGCTGAATGGAAATCCTATTTCCCTGGGTGCTTCTGACGCAGAATGGCAGTCTTTGATGCATGACAAAGTTGGACTGAGCAGTGAGAGTTCTTGTAATAACTCCCAGGCTCAGTATCTGAATTCATTTGCACTATACAACAATGGACTGGATCATCAACAGAACAGACGTAATCCTTTGTTTCTGAATCCTCTGATTGTTCCAGTGGAAAATCTCCAGCCAGAGAAGCCAAGGGGTTTCATTGATGCTTGGTCCAACACAGGAACTGGCGAAAACAATGCCAACACTAACACCACCACCAGCAAGAACTCTGCAGCATCAATTGGTAAATTATCCCTTTCTTCTCTTGATCTATCAATGGGAGGTGGTGCTATGAACCAAGATGCAGGTAATGTTAACATAGGGTTGGGTCCAATGGAACCTATTGCAAACGCAACCACTGATACCAAAATCTCTCTCTCAAACTGGCTCAACCCAGCACCTTGGGTGGCTTCAACCCTTGGAGGACCTCTAGCTGAAGTTCTTAGGTCAAGCACAGTCAATGCCACCACCAACGAAGCAACCTCCAGCACACCCTCACCAGCCACTACACATGTTGAATCTAACAGTCCTCTGGGAACAATGGTGTCATCTCCATCTGGGGTGTTGCAGAAATCGCTTGTTTCACTGTCTGATAGCAGTAGTAATAGCAGCCCAACAGTTGCATCATCAAGGGCCAATTCCGAGAGGACCTTGCTCAGGTTTCAACGAAATGTAAATTAA 1758 0.4681 MGEFGIPHTRKRSSGSNSNSGSSLVGLDVKVQSPEALFHNKMTMMAHHNHHHRPLSSPFDNDSCAGDGDGPTAYMSFTNHINLVSGASVLPPAIDGGCGAPAAVRTLQPFDISPYTSPTTTSSSFKPSAGGMAASLGFPFTSAQWRELERQAMIYKYMMASVPVPPDLLIPTSLTTSSRMDGGFNLRLASSTDPEPGRCRRTDGKKWRCSRDVAPNHKYCERHMHRGRPRSRKPVEVNTNTTIPPSINNNNSHQIKRPRHECNPFSSIPDVTGAISNPTSRKHGSSPHFLGSSTTPPYLESPNSLANFGLKTANLDTMTSVPANKESRGLDWMLNGNPISLGASDAEWQSLMHDKVGLSSESSCNNSQAQYLNSFALYNNGLDHQQNRRNPLFLNPLIVPVENLQPEKPRGFIDAWSNTGTGENNANTNTTTSKNSAASIGKLSLSSLDLSMGGGAMNQDAGNVNIGLGPMEPIANATTDTKISLSNWLNPAPWVASTLGGPLAEVLRSSTVNATTNEATSSTPSPATTHVESNSPLGTMVSSPSGVLQKSLVSLSDSSSNSSPTVASSRANSERTLLRFQRNVN* 586
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g01295 585 MobiDBLite consensus disorder prediction 274 300 - -
Lapu9g01295 585 MobiDBLite consensus disorder prediction 234 253 - -
Lapu9g01295 585 PANTHER GROWTH-REGULATING FACTOR 5 121 439 IPR031137 GO:0005634|GO:0006351|GO:0032502
Lapu9g01295 585 Pfam QLQ 139 171 IPR014978 GO:0005524|GO:0005634|GO:0006355
Lapu9g01295 585 Pfam WRC 194 236 IPR014977 -
Lapu9g01295 585 ProSiteProfiles QLQ domain profile. 139 174 IPR014978 GO:0005524|GO:0005634|GO:0006355
Lapu9g01295 585 MobiDBLite consensus disorder prediction 1 25 - -
Lapu9g01295 585 ProSiteProfiles WRC domain profile. 193 237 IPR014977 -
Lapu9g01295 585 MobiDBLite consensus disorder prediction 514 585 - -
Lapu9g01295 585 MobiDBLite consensus disorder prediction 225 255 - -
Lapu9g01295 585 SMART QLQ_2 138 174 IPR014978 GO:0005524|GO:0005634|GO:0006355
Lapu9g01295 585 MobiDBLite consensus disorder prediction 10 25 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g01295 Lapu-Chr9 27011678 27014287 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu9g01295 139 551 GRF Transcription Factor Family AT4G37740 33.256 2.33e-37 144
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRF Lapu9g01295 WRC 6.4e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g01295 - - gmx:100803096 794.653
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu9g01295 9 27011678 27014287 Lapu9g01295 9 27011678 27014287 ECH