Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g01294 ATGATCTACGTTCGACTTATCTTCCTCTCTTGTTTCCTATTTCATTATTTTCATGCCATCTCATGCAACACTAACACAGACACAAATGCCCTTCTTTCTTTCAAATCTCAAGTCACTGACCCAAAAAATGCTCTCGCGGGGTGGTCTCCGCACTCCAATCACTGCACCTGGTACGGTGTCACATGCTCCAAAGTTGGAAAGAGGGTTCAATCTCTCCATCTACCAGGACTTTCCCTCTCTGGCAAACTCCCCTCTCACCTTTCCAACCTCACTTTCCTACACTCACTCGACCTTTCCAACAACAACTTTCATGGCCAAATTCCCAAACACTTTGCCCATCTCTCACTTCTCAATGTCATTCGATTATCTTCCAACCATCTCAGTGGTACACTTCCACCACAGCTGGGTCATCTCCACCATCTACAAATTTTAGACTTTTCAGTCAATAATCTCACAGGTCAGATTCCTCCATCATTTGCAAATCTCTCTTCTCTTCAGAATCTTTCCTTGGCCAGAAACGCTTTGGAGGGTGAGATTCCAACTGAACTTGGCAATCTCCGCAATCTTTCCTTCCTTCAAATCTCGGACAACAATTTCTCTGGCAAGTTTCCCACTTCTATCTTCAACATGTCTTCCTTAGTCTTTTTATCCGTCACAAGAAACAATCTTACGGGTAAGTTACCACAAAATTTTGGCCATTTTCTTCCAAATTTAAAGAATCTATATCTTGCAACCAATATGTTTGAAGGGGAAATTCCGAATTCCATATCCAATGTCTCACATCTCCAATACATCGACTTAGCACACAATAAATTTCACGGCCCTATACCTCCTTTTAACAACTTCAAACACCTTACCCACCTCATTCTTGGTAATAATTTTCTCTCTTCCACAACCTCCTTAAATTTTCAGTTCTTTGATTCCCTTAGAAACTCCACCAAGTTACAAATTCTCATGATCAATGATAACCATTTGACTGGGGACCTTCCAAGCTCTGTTGCTAATCTGTCTGGGAATCTCCAACAATTCTGTGTAGCTAATAATTTTCTTACTGGTACCATTCCTCAAGGAATGAAGAAATTTCAAAATCTCATATCCTTGTCTTTCGAAAACAATTCTTTCACTGGAGAGTTACCATCGGAAATAGGAGCACTAAATAATCTACAGAACCTTGCGATATACAGCAACAGATTGTCTGGGCAAATTCCAGACATTTTTGGCAATCTCACAAATCTGTCTTTCCTTGGAATGGGAGATAACCAGCTCTGGGGTACAATTCACCAAAGTATTGGACAATGCACGAGGTTAACTTTTCTTGACTTGGCAATGAATAGACTTGGTGGGACCATACCGGAGGAGATTTTCCATCTTTCTGGCTTAAGAACCTTGTATTTAGCAGGAAACTCTCTGCAGGGTCCGCTTCCTCCTAATGTCGGCACCATGAAACAGCTTGAGACCATGTATATTTCTGACAACCAGCTGTCGGGGAACATTCCTGAGGAATTAGGAATCTGTTTTAGCTTGAAGTCGCTAATGATGGCAAGAAACAAATTCAACGGTTCAATCCCAGCTGAAATTGGGAATTTATCATCCCTTGAGACTTTGGATTTATCATCAAACAGTCTGACTGGTCCTATTCCTGAAAGTTTAGAAAAGCTCGAGTATGTACAGAAGTTAAATTTGTCTTTCAACCATTTGGAAGGGGAGGTTCCAATGAAAGGTCTTTTTACGAACCTTACCAAGTTTGATCTTCGAGGTAACAATCAATTGTGTAGCCTTAGCAAGGAAATTGTGCAAAATTTGGGAGTACCCCCGTGTGTTGTTCGTAAAAAGAAAAGAAAGATCTTACTCCCTACCGTACTTGCAGTTGTTGGTGCTACTTCTTTGTTCCTTTCAATGCTCTTTCTGTTTTGGACAATGAAGAAGAAAAGTAAGGAGGGGAAAACCAGTGTGTTATCTGCCCCTTTCAGGGGGTTGCCTCAAAATATAACATATGGTGATATTCGGATAGCTACAGACAATTTTGCAGCTGAAAACTTAATTGGAAAAGGAGGTTTTGGCTCTGTGTACAAGGGCGTGTTCAGCTTCAGCGCTGGTGAAACCGCCACCTTTGCTGTCAAAGTCCTGGACCTGCAACAAAGCAAGGCGTCTAAGAGTTTCAATGCGGAATGTGAAGCTTTGAAAAATGTTAGGCATCGGAACCTAGTGAAGGTTATCACTTCTTGCTCCAGCCTTGATTATAATGGAGAGGAATTTAAGGCCCTTGTTATGCAATTCATGCCCAATGGCAACTTGGACGTGAAAATACACACAGGAGATGAAGAGTCGGGATCCTTTCTAACCTTGATGCAAAGATTGAGCATTGCCATTGATGTTGCTTCTGCTGTGGAGTACTTGCACCATGACTGCGATCCACCAATAGCTCATTGTGATCTGAAACCTGCCAATGTCCTTCTAGATGAAAATATGACTGCACATGTTGTAGACTTTGGATTGGCAAGGTTTCTGTCTCAAAACGTTTCAGAGAAGCAGAGTAGCACCCTAGGACTGAAAGGATCAATTGGCTACATTGCCCCAGAATATGGTTTTGGAAGCAAGGCTTCAACTGAGGGCGATGTGTACAGTTTTGGGATCCTACTGCTAGAGATGTTCACAGCCAAAAGACCAACTGATGAAATGTTCAAAGAAGGATTAAGCCTGAGCAAGTTTGTGTTGGCTATGGATGAGAATGAACTACGAATGGGTGCTGATCCAAGGCTTATTGATGATTATGTATATTCAACTCAAAGTTCAAACGCTGATGATCATAGCAGTGACTTTGGCAGCAACACACATTGGATGCGTAAAGCTGAACAGTGCATAGCTGATGTGATAAGAGTTGGTCTGAGTTGCACAGCTGATCAACCCAAAGATCGATGGAGCATGAGAGACACCTTATCAAAATTGCAAGCTATTAAGCACTCTATGCTGCCT 2973 0.4181 MIYVRLIFLSCFLFHYFHAISCNTNTDTNALLSFKSQVTDPKNALAGWSPHSNHCTWYGVTCSKVGKRVQSLHLPGLSLSGKLPSHLSNLTFLHSLDLSNNNFHGQIPKHFAHLSLLNVIRLSSNHLSGTLPPQLGHLHHLQILDFSVNNLTGQIPPSFANLSSLQNLSLARNALEGEIPTELGNLRNLSFLQISDNNFSGKFPTSIFNMSSLVFLSVTRNNLTGKLPQNFGHFLPNLKNLYLATNMFEGEIPNSISNVSHLQYIDLAHNKFHGPIPPFNNFKHLTHLILGNNFLSSTTSLNFQFFDSLRNSTKLQILMINDNHLTGDLPSSVANLSGNLQQFCVANNFLTGTIPQGMKKFQNLISLSFENNSFTGELPSEIGALNNLQNLAIYSNRLSGQIPDIFGNLTNLSFLGMGDNQLWGTIHQSIGQCTRLTFLDLAMNRLGGTIPEEIFHLSGLRTLYLAGNSLQGPLPPNVGTMKQLETMYISDNQLSGNIPEELGICFSLKSLMMARNKFNGSIPAEIGNLSSLETLDLSSNSLTGPIPESLEKLEYVQKLNLSFNHLEGEVPMKGLFTNLTKFDLRGNNQLCSLSKEIVQNLGVPPCVVRKKKRKILLPTVLAVVGATSLFLSMLFLFWTMKKKSKEGKTSVLSAPFRGLPQNITYGDIRIATDNFAAENLIGKGGFGSVYKGVFSFSAGETATFAVKVLDLQQSKASKSFNAECEALKNVRHRNLVKVITSCSSLDYNGEEFKALVMQFMPNGNLDVKIHTGDEESGSFLTLMQRLSIAIDVASAVEYLHHDCDPPIAHCDLKPANVLLDENMTAHVVDFGLARFLSQNVSEKQSSTLGLKGSIGYIAPEYGFGSKASTEGDVYSFGILLLEMFTAKRPTDEMFKEGLSLSKFVLAMDENELRMGADPRLIDDYVYSTQSSNADDHSSDFGSNTHWMRKAEQCIADVIRVGLSCTADQPKDRWSMRDTLSKLQAIKHSMLP 991
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g01294 991 FunFam LRR receptor-like serine/threonine-protein kinase EFR 647 759 - -
Lapu9g01294 991 FunFam Leucine-rich repeat receptor protein kinase EMS1 203 301 - -
Lapu9g01294 991 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 24 182 - -
Lapu9g01294 991 PANTHER OS04G0122200 PROTEIN 184 986 - -
Lapu9g01294 991 SUPERFAMILY L domain-like 24 310 - -
Lapu9g01294 991 ProSitePatterns Serine/Threonine protein kinases active-site signature. 807 819 IPR008271 GO:0004672|GO:0006468
Lapu9g01294 991 PRINTS Leucine-rich repeat signature 93 106 - -
Lapu9g01294 991 PRINTS Leucine-rich repeat signature 529 542 - -
Lapu9g01294 991 ProSiteProfiles Protein kinase domain profile. 675 990 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu9g01294 991 Pfam Leucine rich repeat N-terminal domain 25 63 IPR013210 -
Lapu9g01294 991 Pfam Leucine rich repeat 507 566 IPR001611 GO:0005515
Lapu9g01294 991 Gene3D Ribonuclease Inhibitor 281 606 IPR032675 -
Lapu9g01294 991 Gene3D Ribonuclease Inhibitor 23 177 IPR032675 -
Lapu9g01294 991 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 760 991 - -
Lapu9g01294 991 SMART LRR_typ_2 162 186 IPR003591 -
Lapu9g01294 991 SMART LRR_typ_2 235 259 IPR003591 -
Lapu9g01294 991 SMART LRR_typ_2 409 433 IPR003591 -
Lapu9g01294 991 SMART LRR_typ_2 457 481 IPR003591 -
Lapu9g01294 991 SMART LRR_typ_2 138 161 IPR003591 -
Lapu9g01294 991 SMART LRR_typ_2 90 113 IPR003591 -
Lapu9g01294 991 SMART LRR_typ_2 210 233 IPR003591 -
Lapu9g01294 991 SMART LRR_typ_2 114 137 IPR003591 -
Lapu9g01294 991 SMART LRR_typ_2 385 408 IPR003591 -
Lapu9g01294 991 SMART LRR_typ_2 529 553 IPR003591 -
Lapu9g01294 991 SMART serkin_6 675 990 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu9g01294 991 Gene3D Ribonuclease Inhibitor 178 280 IPR032675 -
Lapu9g01294 991 Gene3D Phosphorylase Kinase; domain 1 658 759 - -
Lapu9g01294 991 Gene3D Transferase(Phosphotransferase) domain 1 760 989 - -
Lapu9g01294 991 SUPERFAMILY Protein kinase-like (PK-like) 651 982 IPR011009 -
Lapu9g01294 991 ProSitePatterns Protein kinases ATP-binding region signature. 681 707 IPR017441 GO:0005524
Lapu9g01294 991 SMART LRR_sd22_2 385 411 - -
Lapu9g01294 991 SMART LRR_sd22_2 576 595 - -
Lapu9g01294 991 SMART LRR_sd22_2 433 456 - -
Lapu9g01294 991 SMART LRR_sd22_2 529 558 - -
Lapu9g01294 991 SMART LRR_sd22_2 138 164 - -
Lapu9g01294 991 SMART LRR_sd22_2 235 261 - -
Lapu9g01294 991 SMART LRR_sd22_2 481 500 - -
Lapu9g01294 991 SMART LRR_sd22_2 282 303 - -
Lapu9g01294 991 SMART LRR_sd22_2 312 338 - -
Lapu9g01294 991 Pfam Protein tyrosine and serine/threonine kinase 678 980 IPR001245 GO:0004672|GO:0006468
Lapu9g01294 991 SUPERFAMILY L domain-like 339 594 - -
Lapu9g01294 991 Pfam Leucine Rich Repeat 93 114 IPR001611 GO:0005515
Lapu9g01294 991 Pfam Leucine Rich Repeat 140 162 IPR001611 GO:0005515
Lapu9g01294 991 FunFam LRR receptor-like serine/threonine-protein kinase EFR 302 612 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g01294 Lapu-Chr9 27004346 27007534 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu9g01294 26 987 Receptor kinase-like Gene Family AT3G47570 41.018 0.0 714
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Lapu9g01294 PK_Tyr_Ser-Thr 2.7e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g01294 - - gmx:100776054 1501.88