Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g01293 ATGCTCATTCACTTCTACATGACACTCGCCCAACACTGTCAACTTTTACTCATCATGACTCCAATGAGACTCATTTTGCTCTTATGTTTCATACTTCCTCATTTTCATTACATCCTATGCAACACTCACACTGACAGAGATGCCCTTCTTTCTTTCAAATCTCAAGTCACTGACCCAAAAAATGCTCTCGCTGGGTGGTCTCCACACTCCAATCACTGCACCTGGTACGGTGTCACATGCTCCAAAGTTGGAAAGAGGGTTCAATCTCTCCATCTACCAGGACTTTCCCTCTCTGGCAAACTCCCCTCCCACCTTTCCAACCTCACTTTCCTACACTCACTCGACCTTTCCAACAACAACTTTCAAGGCCAAATTCCCAAACACTTTTCCCATCTCTCACTTCTCAATGTCATTCGATTATCTTCCAACCATCTCAGTGGTACACTTCCACCACAGCTGGGTCATCTCCACCATCTACAAATTTTAGACTTTTCAGCCAATAATCTCACAGGTCAGATTCCTCCATCATTTGCCAATCTCTCTTCTCTTCATAATCTTTCCTTGGCAAGCAACGCTTTGGAGGGTGAGATTCCAACTGAACTTGGCAATCTCCGCAATCTTTCCTTCCTTCAAATCTCGGACAACAATTTCTCTGGCAAGTTTCCCGCTTCTATCTTCAACATGTCTTCCTTAGTCTTTTTATCCGTCACAAGCAACAATCTTACGGGTAAGTTACCACAAAATTTTGGCCATTTTCTTCCAAATTTAAAGAATCTATATCTTGCAGCCAATATGTTTGAAGGGGTAATTCCGAATTCCATATCCAATTTCTCACATCTCCAATACATCGACTTAGCACACAATAAATTTCACGGCCCTATACCTCCATTTAACAACTTCAAAAACCTTACCCACCTCATTCTTGGTAATAATTTTCTCTCTTCCACAACCTCCTTAAATTTTCAGTTCTTTGATTCCCTTAGAAACTCCACCAAGTTGCAAGAACTCCTGATCTTTGAAAACCATTTGGCCGGGGAGCTTCCAAACTCTTTGGCGAATCTTTCATCCAATCTCCAACATTTTTGTGTTGCTGGTAACCTTTTCACTGGCAACATTCCTCAAGGAATAAAGAATTTTGAAAACATAATATCCTTGTCCTTTGAAAATAATTTTTTCACTGGAGAGTTGCCATCAGAAATAGGAGCACTAAATAATCTACAGAAACTTGCGATATACAGCAACAGATTGTCTGGGCAAATTCCTGACATTTTTGGCAATCTCACAAATCTGTCTTTCCTTAAAATGGGAGATAACCAGCTCTCGGGTAGAATTCACCCAAGTATTGGACAATGCAAGAGATTAACTATTCTTGATTTGGAAATAAACAGACTTGGTGGGACCATACCAGAGGAGATTTTTCAGCTTTCTGGCTTAACAAGCTTGAATTTAGCAGGAAACTCTCTGCAAGGTCCGCTTCCTCCTAAGGTCGGCAGCATGGAACAGCTTGAGACCATGGATATTTCTGACAACCAGTTGTCAGGGAACATTCCTAAGGAAATAGACCGGTGTCTTAGCTTGAATTGGCTAAGGATGGCAAGAAACAAATTCAATGGTTCAATCCCAACTAAAATTGGGAATTTAGCATCCCTTGTGACTTTGGATTTATCATCAAACAGTCTCACTGGTCCTATTCCTGAAAGTTTAGAAAAACTAGAGTATATACAGAAACTAAATTTGTCTTTCAACCATTTGGAAGGGGAGGTTCCAATGAAAGGTCTTTTTACGAACCTAACCAAATTTGATATTCGAGCTGAAAACTTGATCGGAAAAGGAGGCTTTGGTTCTGTGTATAAGGGTGTGTTCAGCTTCAGCACTGGCGAAACCGCCACTCTCGCTGTCAAAGTGCTGGACCTGGAGCAAAACAAAGCTTCCAAGAGTTTCATTGCTGAATGCGAAGCTTTGAAAAATGTCAGGCATCGGAACCTAGTGAAGGTCATCACTTCTTGCTCCAGCCTTTGTTACAACGGGGAGGAATTTAAGGCCCTTGTTATGCAATTCATGCCCAATGGCAACTTGGACAAGAAAATACACACGGAAGATGAAGAGTCGGGATCTTTTCTAACCTTGATGCAAAGATTGAACATTGCCATTGACGTTGCTTCTGCTATGGACTACTTGCACCATGGCTGCGACCCACCAATAGTTCATTGTGATCTGAAACCTGCCAATGTCCTTCTAGATGAAAATATGGTAGCACATATTGCAGATTTTGGATTGGCAAGATTTCTCTCCCAAAATACATCAGAGAAGCAAAGCACTCTAGGGCTGAAAGGATCGATCGGCTACATTGCCCCAGAATATGGTCAAGGAGGCAAGGCTTCAACTGAGGGTGATGTGTACAGTTTTGGGACTCTACTGTTAGAGACGATCACAGCCAAAAAACCAACTGATGAAATATTCAAAGAAGGATTGAGCGTAAGCAAATTTTTCTCAGCCATGGATGAGAATGAAATGCTGAAAGTTGTTGAAAGAAGGCTTATTGATGGTTATGAATATTGGAAACAAAGCTCAAGCAGTGATGATCATAGCGGTGGTTTTAGCGGCAAAACACATTGGATGAATAAAGCTGAGCAGTGCATAGCTGATGTGATAAGAGTTGGACTGTGTTGCACGGCCGATCAACCCAAAGAACGATGGAGCATGAGAGACGCCTTATCAAAATTGCAAACAATTAAGCACTCTATGCTGTCCTTT 2754 0.4158 MLIHFYMTLAQHCQLLLIMTPMRLILLLCFILPHFHYILCNTHTDRDALLSFKSQVTDPKNALAGWSPHSNHCTWYGVTCSKVGKRVQSLHLPGLSLSGKLPSHLSNLTFLHSLDLSNNNFQGQIPKHFSHLSLLNVIRLSSNHLSGTLPPQLGHLHHLQILDFSANNLTGQIPPSFANLSSLHNLSLASNALEGEIPTELGNLRNLSFLQISDNNFSGKFPASIFNMSSLVFLSVTSNNLTGKLPQNFGHFLPNLKNLYLAANMFEGVIPNSISNFSHLQYIDLAHNKFHGPIPPFNNFKNLTHLILGNNFLSSTTSLNFQFFDSLRNSTKLQELLIFENHLAGELPNSLANLSSNLQHFCVAGNLFTGNIPQGIKNFENIISLSFENNFFTGELPSEIGALNNLQKLAIYSNRLSGQIPDIFGNLTNLSFLKMGDNQLSGRIHPSIGQCKRLTILDLEINRLGGTIPEEIFQLSGLTSLNLAGNSLQGPLPPKVGSMEQLETMDISDNQLSGNIPKEIDRCLSLNWLRMARNKFNGSIPTKIGNLASLVTLDLSSNSLTGPIPESLEKLEYIQKLNLSFNHLEGEVPMKGLFTNLTKFDIRAENLIGKGGFGSVYKGVFSFSTGETATLAVKVLDLEQNKASKSFIAECEALKNVRHRNLVKVITSCSSLCYNGEEFKALVMQFMPNGNLDKKIHTEDEESGSFLTLMQRLNIAIDVASAMDYLHHGCDPPIVHCDLKPANVLLDENMVAHIADFGLARFLSQNTSEKQSTLGLKGSIGYIAPEYGQGGKASTEGDVYSFGTLLLETITAKKPTDEIFKEGLSVSKFFSAMDENEMLKVVERRLIDGYEYWKQSSSSDDHSGGFSGKTHWMNKAEQCIADVIRVGLCCTADQPKERWSMRDALSKLQTIKHSMLSF 918
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g01293 918 Gene3D Ribonuclease Inhibitor 298 609 IPR032675 -
Lapu9g01293 918 FunFam LRR receptor-like serine/threonine-protein kinase EFR 320 613 - -
Lapu9g01293 918 SMART LRR_typ_2 108 131 IPR003591 -
Lapu9g01293 918 SMART LRR_typ_2 132 155 IPR003591 -
Lapu9g01293 918 SMART LRR_typ_2 180 204 IPR003591 -
Lapu9g01293 918 SMART LRR_typ_2 156 179 IPR003591 -
Lapu9g01293 918 SMART LRR_typ_2 475 499 IPR003591 -
Lapu9g01293 918 SMART LRR_typ_2 403 426 IPR003591 -
Lapu9g01293 918 SMART LRR_typ_2 547 571 IPR003591 -
Lapu9g01293 918 SMART LRR_typ_2 300 326 IPR003591 -
Lapu9g01293 918 SMART LRR_typ_2 253 276 IPR003591 -
Lapu9g01293 918 SMART LRR_typ_2 427 451 IPR003591 -
Lapu9g01293 918 SMART LRR_typ_2 228 251 IPR003591 -
Lapu9g01293 918 Gene3D Ribonuclease Inhibitor 193 297 IPR032675 -
Lapu9g01293 918 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 687 918 - -
Lapu9g01293 918 SMART LRR_sd22_2 253 279 - -
Lapu9g01293 918 SMART LRR_sd22_2 300 321 - -
Lapu9g01293 918 SMART LRR_sd22_2 156 182 - -
Lapu9g01293 918 SMART LRR_sd22_2 403 429 - -
Lapu9g01293 918 SMART LRR_sd22_2 547 576 - -
Lapu9g01293 918 Pfam Leucine rich repeat N-terminal domain 44 81 IPR013210 -
Lapu9g01293 918 Pfam Leucine rich repeat 453 512 IPR001611 GO:0005515
Lapu9g01293 918 Pfam Leucine rich repeat 231 290 IPR001611 GO:0005515
Lapu9g01293 918 Pfam Leucine rich repeat 526 584 IPR001611 GO:0005515
Lapu9g01293 918 Pfam Leucine rich repeat 111 169 IPR001611 GO:0005515
Lapu9g01293 918 Pfam Protein tyrosine and serine/threonine kinase 604 844 IPR001245 GO:0004672|GO:0006468
Lapu9g01293 918 FunFam Leucine-rich repeat receptor protein kinase EMS1 221 319 - -
Lapu9g01293 918 SUPERFAMILY Protein kinase-like (PK-like) 601 913 IPR011009 -
Lapu9g01293 918 SUPERFAMILY L domain-like 43 315 - -
Lapu9g01293 918 ProSitePatterns Protein kinases ATP-binding region signature. 608 634 IPR017441 GO:0005524
Lapu9g01293 918 Gene3D Transferase(Phosphotransferase) domain 1 688 916 - -
Lapu9g01293 918 SUPERFAMILY L domain-like 357 607 - -
Lapu9g01293 918 Gene3D Ribonuclease Inhibitor 41 192 IPR032675 -
Lapu9g01293 918 PANTHER OS04G0122200 PROTEIN 202 598 - -
Lapu9g01293 918 SMART serkin_6 602 916 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu9g01293 918 ProSitePatterns Serine/Threonine protein kinases active-site signature. 734 746 IPR008271 GO:0004672|GO:0006468
Lapu9g01293 918 Gene3D Phosphorylase Kinase; domain 1 610 687 - -
Lapu9g01293 918 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 42 200 - -
Lapu9g01293 918 ProSiteProfiles Protein kinase domain profile. 602 916 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g01293 Lapu-Chr9 26984258 26987508 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu9g01293 43 913 Receptor kinase-like Gene Family AT3G47090 35.394 1.83e-178 541
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Lapu9g01293 PK_Tyr_Ser-Thr 1.5e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g01293 - - gmx:100802571 854.744