Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g01279 ATGGTTTTGCCACTTGCACTGTTTGGTAACTGTTGGTGTTTGTGTTCTTCTACCATTTTTCATCCATTTCCACTACTAAACCCACCCTTTCCTTATTCAATCTTTCACCCTAAACTTCAGCCTCAACCCCAATGCTCCCTTGCCAAAACCCACATCAAACCCCAACTACCAAACCCTGACCCCATTCGCCGCCGTCGTTGCACCAATTCCCTTCCCATTGCTGATGCCCAAATCGCGTCGTTCTTTGCTCTGTTTCAAGAGATTGGAATTGGCTTTGAGGAAACTCAAGTTCTCTTCTCCCACAACCCTGACCTAACCTCTGTGTCTGTAGAATCATTGCGCGCTCGCCTTCTTTCTCTACGATCTCTCGACTTCGACCCTCTCGCTCTCGGCAAATTAATCACAAAGCGCCCAACTGTCCTAACAGACCACCAAATTGACCCTTTGCTAACCTTCCTTCGAGACGAATTGCAAGGAAAACTCGAGAAACCTCGACTGAATCGCCTCTTATCTTCTACTGAACAAAAATTATTGGTGAGTTTTCCTCAGAAGGTTCGATTCCTCGTTGACCGTGGGGTCCCCGTTGACCAGGTTGTGAATGTGCTCAACAAAGTGAGTTTGCCAAAGGTCTTGTGCGGCAGGTCGGTGGATGAAATCGATAGAACTTTAGCTTTCTTAGAACCCTTTGGTGGCATTGCTTTGATTCTTAAACGCCCTCAAATTTTGAACCATGATTTGGATGCTCAACTTATTCCTAGAGTCAATGTTCTGATGGAGCTTAGTGATGGAGATGTGGATAGTGTTGGGAAAGTGCTGGTTAGGTTTCCCATTTTTTTGAACTATAGTGTGGAACATGTGGAGGGGCATGTAGAGTTCTTGAGTTCTTTTGCTGAGCTAGATTACAGACAGATATTTAGGATAATACAAGTTTATCCGGCTATTGTTACTGCTAGCAGAGAGAGGAAACTGCGTCCTAGAATACAGTTTCTCAAGGAATGTGGGTTGGATTCAGATGACATCTTCAAGTTCTTGGTTAAAGCGCCCACTTTTCTCAGCACTTCATTCCATGAGAACATTGCATATAAGCTGGTGTTGCTAGTCAAGATTGGGTATAGGTACAGAACGAAGGACTTCGCAGTGGCAGTTAGGTCTGCAACTAGGACAAACAGTCTGAACATGCAGAAGGTGGTTGGTATGTACTTGAATTATGGGTTTTCATGTGAAGAGATCGTTGCCATGAGCAAGAAACATCCACAGATACTGCAGTATAATCATGCTTCTTTGGAGATGAAGATGGAGTACTTGATCGAGGAAATGGGGCGTGACATTGAGGAGTTACTGGTTTTTCCTGCATTCCTTGGGTACAAGCTTGATGATAGGATTAAGCATAGGTATGAAGTGAAGAAGAGTGTTAGAGGTGCGGGAATGTCTATCAACAAGCTTTTATCTGTTTCCGAGGAGACATTCACTGGCAAACGAAAAAAGGCCCATGCATAG 1497 0.4429 MVLPLALFGNCWCLCSSTIFHPFPLLNPPFPYSIFHPKLQPQPQCSLAKTHIKPQLPNPDPIRRRRCTNSLPIADAQIASFFALFQEIGIGFEETQVLFSHNPDLTSVSVESLRARLLSLRSLDFDPLALGKLITKRPTVLTDHQIDPLLTFLRDELQGKLEKPRLNRLLSSTEQKLLVSFPQKVRFLVDRGVPVDQVVNVLNKVSLPKVLCGRSVDEIDRTLAFLEPFGGIALILKRPQILNHDLDAQLIPRVNVLMELSDGDVDSVGKVLVRFPIFLNYSVEHVEGHVEFLSSFAELDYRQIFRIIQVYPAIVTASRERKLRPRIQFLKECGLDSDDIFKFLVKAPTFLSTSFHENIAYKLVLLVKIGYRYRTKDFAVAVRSATRTNSLNMQKVVGMYLNYGFSCEEIVAMSKKHPQILQYNHASLEMKMEYLIEEMGRDIEELLVFPAFLGYKLDDRIKHRYEVKKSVRGAGMSINKLLSVSEETFTGKRKKAHA* 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g01279 498 PANTHER CGI-12 PROTEIN-RELATED 77 215 IPR003690 GO:0003690|GO:0006355
Lapu9g01279 498 SMART mt_12 411 442 IPR003690 GO:0003690|GO:0006355
Lapu9g01279 498 SMART mt_12 443 475 IPR003690 GO:0003690|GO:0006355
Lapu9g01279 498 SMART mt_12 341 372 IPR003690 GO:0003690|GO:0006355
Lapu9g01279 498 SMART mt_12 131 160 IPR003690 GO:0003690|GO:0006355
Lapu9g01279 498 SMART mt_12 232 263 IPR003690 GO:0003690|GO:0006355
Lapu9g01279 498 SMART mt_12 269 300 IPR003690 GO:0003690|GO:0006355
Lapu9g01279 498 SMART mt_12 96 126 IPR003690 GO:0003690|GO:0006355
Lapu9g01279 498 SMART mt_12 305 336 IPR003690 GO:0003690|GO:0006355
Lapu9g01279 498 FunFam - 61 261 - -
Lapu9g01279 498 Gene3D Transcription termination factor 3, mitochondrial 287 497 IPR038538 -
Lapu9g01279 498 Gene3D Transcription termination factor 3, mitochondrial 73 261 IPR038538 -
Lapu9g01279 498 Pfam mTERF 327 489 IPR003690 GO:0003690|GO:0006355
Lapu9g01279 498 Pfam mTERF 84 363 IPR003690 GO:0003690|GO:0006355
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Lapu9g01279 mTERF 6.6e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g01279 - - pvu:PHAVU_009G045200g 860.907