Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g01271 ATGGGTTCAACAGGTGAGACTCAGATCACTCCAAGCCATGTGTCTGACGAAGAGGCAAACCTGTTTGCCATGCAGCTGGCGAGTGCCTCTGTCCTCCCAATGGTTCTAAAATCAGCTATTGAGCTTGATCTGTTGGAAATCATAGCCAAGGCTGGCCCTGGAGTTCATCTTTCTCCCACTCAAATTGCTTCTCAACTCCCAACACGCAACCCTGATGCACCCGTCATGTTGGACCGCATATTGCGCCTATTGGCTTCCTACAATATCCTCTCTTTCACTCTCCGCAATCTCCCTGATGGCAAGGTTGAGAGGCTCTATGGTCTTGCTCCTGTTGCTAAGTACCTGGTCAAGAACGAAGATGGCGTCTCCATTGCTGCTCTCAACCTCATGAACCAGGACAAAGTCCTCATGGAAAGCTGGTACTACTTGAAAGATGCAGTTCTTGAAGGGGGCATTCCATTTAACAAGGCATATGGAATGACAGCCTTTGAATACCATGGAACAGATCCAAGGTTTAACAAGGTTTTCAACAAGGGTATGGCTGATCACTCTACCATCACAATGAAGAAAATTCTTGAGATCTACACAGGCTTTGAGGGTCTTAAATCTCTGGTTGATGTTGGTGGTGGAACTGGAGCTATAATAAACATGATAGTCTCAAAGTATTCCACTATTAAGGGTATTAATTTTGATTTACCCCATGTCATCGACGATGCTCCATCTTATCCAGGAGTGGAGCATGTTGGTGGAGACATGTTTGTCAGTGTTCCAACAGCTGACGCTATTTTTATGAAGTGGATTTGCCACGATTGGAGTGATGAACACTGTTTGAAGTTTTTGAAGAACTGCTACGATGCATTACCCGAAAATGGGAAGGTGATTGTGGCAGAATGCATTCTTCCAGTGGCTCCAGATTCTAGCTTGGCCACAAAGGGTGTGGTTCACATCGATGTGATCATGTTGGCTCATAATCCAGGTGGGAAAGAGAGAACAGAGAAAGAGTTTGAGGCTCTGGCCAAAGGATCCGGATTCCAAGGTTTCCGAGTCTTCTGTTGTGCTTTCAATACCTACATCATGGAGTTTCTCAAGAAAACACACTCAAAGAAGAAAAAATGA 1116 0.4507 MGSTGETQITPSHVSDEEANLFAMQLASASVLPMVLKSAIELDLLEIIAKAGPGVHLSPTQIASQLPTRNPDAPVMLDRILRLLASYNILSFTLRNLPDGKVERLYGLAPVAKYLVKNEDGVSIAALNLMNQDKVLMESWYYLKDAVLEGGIPFNKAYGMTAFEYHGTDPRFNKVFNKGMADHSTITMKKILEIYTGFEGLKSLVDVGGGTGAIINMIVSKYSTIKGINFDLPHVIDDAPSYPGVEHVGGDMFVSVPTADAIFMKWICHDWSDEHCLKFLKNCYDALPENGKVIVAECILPVAPDSSLATKGVVHIDVIMLAHNPGGKERTEKEFEALAKGSGFQGFRVFCCAFNTYIMEFLKKTHSKKKK* 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g01271 371 PIRSF O-mtase 1 363 IPR016461 GO:0008168
Lapu9g01271 371 CDD AdoMet_MTases 204 295 - -
Lapu9g01271 371 Gene3D - 1 115 IPR036388 -
Lapu9g01271 371 SUPERFAMILY "Winged helix" DNA-binding domain 15 119 IPR036390 -
Lapu9g01271 371 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 121 361 IPR029063 -
Lapu9g01271 371 PANTHER O-METHYLTRANSFERASE 23 348 IPR016461 GO:0008168
Lapu9g01271 371 FunFam Caffeic acid 3-O-methyltransferase 3 115 - -
Lapu9g01271 371 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 24 363 IPR016461 GO:0008168
Lapu9g01271 371 Gene3D Vaccinia Virus protein VP39 116 363 IPR029063 -
Lapu9g01271 371 Pfam O-methyltransferase domain 140 345 IPR001077 GO:0008171
Lapu9g01271 371 Pfam Dimerisation domain 34 85 IPR012967 GO:0046983
Lapu9g01271 371 FunFam Caffeic acid O-methyltransferase 116 363 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g01271 Lapu-Chr9 26681972 26684210 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu9g01271 1 364 Monolignol Biosynthesis Gene Families AT5G54160 77.473 0.0 594
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g01271 K13066 - gmx:100806525 697.582