Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g01265 ATGAGTTCCGTCGAGTGTTATCCATCGCGCGGGGATGATGTCGCCGTCGTATCGCTGGATTCTCTCCCGTTAGGGTTCCGATTCCGGCCTACCGACGAGGAACTCATCGATTACTACCTGCGACAGAAGATTAACGGCAATGGTGCCGAGGTTTGGGTTATCCGAGAAATTGATGTCTGCAAATGGGAGCCGTGGGACATGCCTGATTTGTCGGTGATACGGAACAAGGATCCGGAATGGTTCTTCTTCTGTCCACAAGACAGAAAGTATCCAAATGGGCATCGATTGAACAGAGCAACGACTCGTGGGTATTGGAAGGCAACTGGGAAGGATCGTAAAATAAAGTCTGGGATGATTTTGATTGGAATGAAGAAGACTTTGGTGTTCTACACTGGTCGTGCACCCAAAGGGAAGAGGACCAATTGGGTTATGCACGAGTATCGCCCCACCTTGAAAGAGCTTGATGGCACCAATCCTGGACAGAATGCATATGTCCTATGTCGTTTGTTTAAGAAACAAGATGAGAGCCTTGAAGTTTCGCACTGTGATGAGGCAGAACAGACTGCTTCAACTCCGATTGCTGCCAATTACTCTACGGAGGAAATACAGTCTGGTCTGGCTGTTGTTGCAGTGTCCCCGTCACTGGTTACAGAGGATGATAAGCACCAGGCAATTATCCCTACGCACTCTGAGGAAGCAATATCCAACGTTATAACTCCGGTTGACTGCCATAGTGATGGATATGATGCTTCAGATGCACAAAATCAGTATGTGGCACCAGCTGCAGAGGAGTTTCAGCCACTGAACGATGATATATATTACGACCCAAAAAACGAGATATTGGATGACAAATTATTCTCCCCTGTACTTGCACAAATTCAGCCAGAATTTCATTATCAACCAAACAGTGAATCAGATAGTTGGTATGGGCTTCAATATGGTACTAATGAGACAAACATTTCAGATTTCTTGAATTCTGTTGTTAACTGGGACGAGCTACCCTACGAGGAGCCCAATTGTCAACAATGGAGCTACCCCTCGTTTAATGCTCAGAATAGCGTATTAGGCAGCAACATAGATTCTGAACTGGCCAATATGACATATATGCAAACTGGTTATGCTGAGGAGGCAAACGACAGAAAGATTCCTTTGGTGATAGCTCCAGAATTTTGCAGCACCACTGGCATCCCCATTGACCGTGGTGGTGATGAGCAGAAGGGCAATGTTGAGTTATTTCAAAACAATTCCCAGAGAGCTTTTACTGATGTTAATATGGGCCAAGTATACAATTTAGTCAATGATTATCAGCAACCAAGAGTCTTTAACACAGTTCCTAGTGGGGATACTGGAATCATTAGGAGGACTCGAGCGGTACAAAAGGAAAAGCTAAGTGCAAACGTAACACAAGGTACAGCACAGAGGAGAATTCGTTTGGTGAAAACTGAGCTCGATTCAAAACCAATCATTGCTGTGGAGGAGAAAGCTTCAGAAAACCATGCTTCGGATGAAAGTGCAACTCTTACTAATGATGGGAATGAACTGCAGAAGATACCTGAGTCAAATGGCAATCGAAAGATTTGCCGACAAGTTACAAAAGCAAGTTCCAGCTTGGGATTAAAAGATTTTTTATTGCTCAGAAGGGTGCCATACATTTCAAAGGATACCTCCAGTCGTGCCAAGTGCTCCTCTGTTTTTGTAGTTTCTGCCTTTCTAATGGTCTCACTTGTGGTCTTTACTGACATCTGCGGATATCTTAAATTCTAA 1764 0.4433 MSSVECYPSRGDDVAVVSLDSLPLGFRFRPTDEELIDYYLRQKINGNGAEVWVIREIDVCKWEPWDMPDLSVIRNKDPEWFFFCPQDRKYPNGHRLNRATTRGYWKATGKDRKIKSGMILIGMKKTLVFYTGRAPKGKRTNWVMHEYRPTLKELDGTNPGQNAYVLCRLFKKQDESLEVSHCDEAEQTASTPIAANYSTEEIQSGLAVVAVSPSLVTEDDKHQAIIPTHSEEAISNVITPVDCHSDGYDASDAQNQYVAPAAEEFQPLNDDIYYDPKNEILDDKLFSPVLAQIQPEFHYQPNSESDSWYGLQYGTNETNISDFLNSVVNWDELPYEEPNCQQWSYPSFNAQNSVLGSNIDSELANMTYMQTGYAEEANDRKIPLVIAPEFCSTTGIPIDRGGDEQKGNVELFQNNSQRAFTDVNMGQVYNLVNDYQQPRVFNTVPSGDTGIIRRTRAVQKEKLSANVTQGTAQRRIRLVKTELDSKPIIAVEEKASENHASDESATLTNDGNELQKIPESNGNRKICRQVTKASSSLGLKDFLLLRRVPYISKDTSSRAKCSSVFVVSAFLMVSLVVFTDICGYLKF* 588
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g01265 587 FunFam Nac domain-containing protein 86 31 175 - -
Lapu9g01265 587 Gene3D NAC domain 31 176 IPR036093 GO:0003677|GO:0006355
Lapu9g01265 587 ProSiteProfiles NAC domain profile. 22 172 IPR003441 GO:0003677|GO:0006355
Lapu9g01265 587 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 21 249 - -
Lapu9g01265 587 MobiDBLite consensus disorder prediction 501 519 - -
Lapu9g01265 587 MobiDBLite consensus disorder prediction 495 519 - -
Lapu9g01265 587 Pfam No apical meristem (NAM) protein 23 148 IPR003441 GO:0003677|GO:0006355
Lapu9g01265 587 SUPERFAMILY NAC domain 18 172 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g01265 Lapu-Chr9 26621009 26631601 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu9g01265 8 503 NAC Transcription Factor Family AT1G33060 37.732 3.29e-93 298
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lapu9g01265 NAM 2.2e-35 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g01265 - - gmx:100777071 954.896