Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lapu9g01260 | ATGAAGACGATTCTGTCATCAGAGACTATGAACATTCCCGACGGTGTGAGCATCAAGGTTCACGCCAAGGTCATCGAGGTTGAAGGCCCTCGTGGAAAACTAGTTCGAGACTTCAAACACCTCAACCTCGATTTTCAGCTCATCACCGACGAGAACGGCAACAAGAAGCTCAAGATCGACGCCTGGTTTGGCTCTCGGAAAACCTCCGCCGCCATTCGCACCGCCCTCAGCCACGTTGACAATCTCATCACCGGCGTTACCAAGGGCTACCGCTACAAGATGAGGTTCGTGTACGCTCACTTCCCCATCAACGCCAGCATTGCCAACAACAATAAATCTATCGAAATCCGAAATTTCCTCGGCGAGAAGAAGGTGAGAAAAGTTGACATGCTGGAGGGTGTATCTGTTGTTCGATCTGAGAAGGTGAAGGATGAGTTGGTTTTGGATGGAAACGATATTGAGCTTGTTTCCAGGTCTTGTGCTCTGATTAACCAGAAATGCCATGTTAAGAACAAAGATATTCGGAAGTTCCTTGATGGTATTTACGTCAGCGAGAAGGGAACCATAGTAGTAGAAGAGTAG | 582 | 0.4794 | MKTILSSETMNIPDGVSIKVHAKVIEVEGPRGKLVRDFKHLNLDFQLITDENGNKKLKIDAWFGSRKTSAAIRTALSHVDNLITGVTKGYRYKMRFVYAHFPINASIANNNKSIEIRNFLGEKKVRKVDMLEGVSVVRSEKVKDELVLDGNDIELVSRSCALINQKCHVKNKDIRKFLDGIYVSEKGTIVVEE* | 194 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lapu9g01260 | 193 | Pfam | Ribosomal protein L6 | 101 | 180 | IPR020040 | GO:0003735|GO:0005840|GO:0006412|GO:0019843 | |
Lapu9g01260 | 193 | Pfam | Ribosomal protein L6 | 12 | 89 | IPR020040 | GO:0003735|GO:0005840|GO:0006412|GO:0019843 | |
Lapu9g01260 | 193 | FunFam | 60S ribosomal protein L9 | 1 | 89 | - | - | |
Lapu9g01260 | 193 | SUPERFAMILY | Ribosomal protein L6 | 1 | 89 | IPR036789 | GO:0003735|GO:0005840|GO:0006412|GO:0019843 | |
Lapu9g01260 | 193 | Gene3D | - | 90 | 193 | IPR036789 | GO:0003735|GO:0005840|GO:0006412|GO:0019843 | |
Lapu9g01260 | 193 | PIRSF | RPL6p_RPL6a_RPL9e_RPL9o | 1 | 189 | IPR000702 | GO:0003735|GO:0005840|GO:0006412|GO:0019843 | |
Lapu9g01260 | 193 | PANTHER | 60S/50S RIBOSOMAL PROTEIN L6/L9 | 1 | 190 | IPR000702 | GO:0003735|GO:0005840|GO:0006412|GO:0019843 | |
Lapu9g01260 | 193 | ProSitePatterns | Ribosomal protein L6 signature 2. | 165 | 186 | IPR002359 | GO:0003735|GO:0005840|GO:0006412 | |
Lapu9g01260 | 193 | Gene3D | - | 1 | 89 | IPR036789 | GO:0003735|GO:0005840|GO:0006412|GO:0019843 | |
Lapu9g01260 | 193 | FunFam | 60S ribosomal protein L9 | 90 | 193 | - | - | |
Lapu9g01260 | 193 | SUPERFAMILY | Ribosomal protein L6 | 90 | 186 | IPR036789 | GO:0003735|GO:0005840|GO:0006412|GO:0019843 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lapu9g01260 | Lapu-Chr9 | 26565756 | 26567688 | Dispersed/Proximal |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lapu9g01260 | 1 | 193 | Cytoplasmic Ribosomal Protein Gene Family | AT1G33140 | 86.598 | 3.60e-123 | 344 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lapu9g01260 | K02940 | - | gmx:100306058 | 355.14 |