Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g01244 ATGGCGGCAATAGGAGTTGCAGCACAAACGCAGTTACAGTTAGAGAAGCACGTGTTGGAGGGTTTCGGTTCGAAATCCATGGAATTGAAATGGGTGAGTCGAAGAATCAGCAAAAGCTCACAGCTTGAGAAGACGAAGAAGCCGTTGAGACCGCTTTTCCCAATTTACATTTCCACCGACCCACGCCACGTCGATCCTCTCCGTCTCCGAGACCTCTTCGCCGATTGCAACTACTCTACCCAAAAATTTCCCACACGACCCGAACCCGAACCCGTCGACATTCACAAGCTCCGAACTGCTCTGTCTCACAGCGCCGTGGTTGTCTCCGTCTTCTGCAACCTCCGCCATCTAAACGCCGTCGTTCCATATCACGACAATTCATCGTCGTCTTTAATCGCGGATTTCTTCACGCCGGTTTCTCCTTCACGCGATCAATTGGTCGGGTTTGGCCGCGCCGTTTCCGATTGTGGCCTCACCGCTTCGATTTACGATGTCATGGTTATTCCTTCCCTGCAGAGAATGGGAATTGGTCATATGATAGTTAAAAAAATTGCGAGAGTGCTCACAAATAGAGACATATACGACATAGCAGCCCTTTGCTCAGAGAATGAAAGGTTATTTTTTAAGGCGTGTGGATTTGGGGACGACATTTTGGGCTCTACTACCATGATGTACAGAAGAACTGTTCCATTAATAACCCAGGAAGGTGAATAG 714 0.486 MAAIGVAAQTQLQLEKHVLEGFGSKSMELKWVSRRISKSSQLEKTKKPLRPLFPIYISTDPRHVDPLRLRDLFADCNYSTQKFPTRPEPEPVDIHKLRTALSHSAVVVSVFCNLRHLNAVVPYHDNSSSSLIADFFTPVSPSRDQLVGFGRAVSDCGLTASIYDVMVIPSLQRMGIGHMIVKKIARVLTNRDIYDIAALCSENERLFFKACGFGDDILGSTTMMYRRTVPLITQEGE* 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g01244 237 Coils Coil 231 237 - -
Lapu9g01244 237 PANTHER GLUCOSAMINE 6-PHOSPHATE N-ACETYLTRANSFERASE 56 224 IPR039143 GO:0004343|GO:0006048
Lapu9g01244 237 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 142 213 IPR016181 -
Lapu9g01244 237 Gene3D - 53 216 - -
Lapu9g01244 237 CDD NAT_SF 144 193 - -
Lapu9g01244 237 Pfam Acetyltransferase (GNAT) family 143 213 IPR000182 GO:0016747
Lapu9g01244 237 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 92 235 IPR000182 GO:0016747
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g01244 Lapu-Chr9 26386478 26387971 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Lapu9g01244 Acetyltransf_1 3.7e-06 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g01244 - - var:108331472 426.787