Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g01241 ATGGAGGCACTGTTGTGCAGAAAACTAGGTGATCCAACGGTGTGTTTGGAAGACAATGATAGCCCAATAGTTTTGTCAAAGAATCACCCAATTCCCCAACTCGAGTCTCCCACCGCTGTAAGAGTCAGAATCAAAGCCACAAGCTTGAACTTCGCCAATTACTTGCAGATATTGGGCAAGTATCAAGAGAAAGCCTCTTTACCCTTCATCCCAGGCTCCGATTTTTCCGGCTACGTCGACGCCGTTGGGCCCAAAGTTTCGAACTTCCGAGTTGGGGACCCCGTTTGTTCCTTCGTTGGCCTCGGCTCCTTCGCTCAGTTCATCGTCGTTGACGAGTCCCAATTGTTTCGAGTGCCCCAAGGTTGTGATGTTGTTGCTGCTGGAGCACTTGTTGTGGCTTTTGGCACTTCTCATGTAGCACTCCTCCACAGGGCCCAATTGACCTCTGGTCAGGTGTTGTTGGTTTTGGGTGCAGCTGGAGGTGTGGGCCTTGCTGCTGTGCAAATTGGAAAAGCTTGTGGGGCCATTGTCATTGCTGTTGCTAGGGGAGCTGAAAAGGTTCAACTTTTGAAATCTCTTGGTGTTGATCACGTGGTGGACTTGGGCAATGAAAATGTTACTGAGAGTGTCAAGAAGTTTCTTCAGGCAAGAAGGCTTAAGGGGGTTGATGTCCTGTATGACCCGGTTGGAGGCAAACTCACCAAAGAATCTTTGCGGCTTCTAAAATGGGGAGCGAACATCCTCATAATTGGGTTTGCGAGTGGTGAAATTCCTGTCATCCCTGTTAACATAGCTCTTGTTAAGAATTGGACAGTGCATGGCCTTTACTGGGGTAGCTATAAAATACACCGCCCAAGTGTTCTTGAAGATTCTGTCAAGGAGATGCTGTCTTGGTTTGCAAGAGGCTTGATTTCCATCCATATTTCTCATTCATACCCCCTGTCAGAGGCCAACCTTGCCTTTTCTGCCATCAAAGATAGGAAAGTTATTGGGAAGGTGATGATTGTTTTCGATGAGAAACATACAAGATCTAAGCTGTGA 1041 0.4745 MEALLCRKLGDPTVCLEDNDSPIVLSKNHPIPQLESPTAVRVRIKATSLNFANYLQILGKYQEKASLPFIPGSDFSGYVDAVGPKVSNFRVGDPVCSFVGLGSFAQFIVVDESQLFRVPQGCDVVAAGALVVAFGTSHVALLHRAQLTSGQVLLVLGAAGGVGLAAVQIGKACGAIVIAVARGAEKVQLLKSLGVDHVVDLGNENVTESVKKFLQARRLKGVDVLYDPVGGKLTKESLRLLKWGANILIIGFASGEIPVIPVNIALVKNWTVHGLYWGSYKIHRPSVLEDSVKEMLSWFARGLISIHISHSYPLSEANLAFSAIKDRKVIGKVMIVFDEKHTRSKL* 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g01241 346 PANTHER SHORT-CHAIN DEHYDROGENASE/REDUCTASE 1 336 - -
Lapu9g01241 346 SMART PKS_ER_names_mod 17 335 IPR020843 GO:0016491
Lapu9g01241 346 Pfam Alcohol dehydrogenase GroES-like domain 38 97 IPR013154 -
Lapu9g01241 346 Gene3D - 133 280 - -
Lapu9g01241 346 CDD QOR1 1 335 - -
Lapu9g01241 346 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 122 286 IPR036291 -
Lapu9g01241 346 ProSitePatterns Quinone oxidoreductase / zeta-crystallin signature. 150 171 IPR002364 GO:0008270|GO:0016491
Lapu9g01241 346 SUPERFAMILY GroES-like 28 148 IPR011032 -
Lapu9g01241 346 Gene3D - 33 331 - -
Lapu9g01241 346 Pfam Zinc-binding dehydrogenase 161 299 IPR013149 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g01241 Lapu-Chr9 26372370 26379383 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu9g01241 65 266 Monolignol Biosynthesis Gene Families AT1G72680 25.105 9.54e-08 51.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g01241 K00344 - gmx:100817700 619.772