Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g01235 ATGAAGTTGCAGTTCTCTATTGTTGCACTTTTTCTATTAGGCTCCACACTGTCTCTCTGTGGCCTTATTGTAGCTGACTTGAAGTCTGACCAACAAGCTCTGTTGGAGTTTGCTTCAAGTGTTCCACATGCCCCAAGGCTCAACTGGAAGAATGACTCTGCTTCAATTTGTATTTCCTGGGTTGGTGTGGCATGCAACTCAAATGGCACACGTGTCACAGGCCTTCACCTTCCAGGAATGGGATTAACAGGGACCATTCCAGAGAACAGCGTAGAAAAACTAGATGCTCTTAGGGTCCTGAGTCTCCATTCCAATGGCCTTAGAGGAAATCTTCCTCATAACATCCTCTCCATTCCTTCACTCCAATTTGTATACCTTCAGCACAATAACTTCTCTGGCGTAATTCCTTCTCCTGTGTCCCCTAAACTCTTTGCATTGGATATTTCCTTTAACTCCTTTTCTGGCAGCATCCCATCTGCATTTCAGAACCTGAGAAGACTCACGTGGTTGTATCTCCAAAACAATTCCATATCTGGTGATATTCCTGACTTCAACCTTCCAAGTCTCAAACAATTGAACTTGAGCTATAATAACTTGAATGGCTCAATTCCAAATTCCATAAAGACATTCCCTTATTCTTCTTTTGTCGGGAATTCTCACTTATGTGGGCCACCACTAAATGATTGCTCTACAATCACCCCTTCTCCATCTCCTTCCACTGATGATTACCAGCCACTCACTCCACCAACCACCCAAAACCAAAAGGGTACCAACCATAAGAAAAGCTTTGGCCTGGCTACTATCCTTGCTCTAGTCATTGGAGTCTTTGCCTTCCTCTCTCTACTAGTTGTAGTGATCTGTGTGTTCTGTTTGAAGAGGAAGAAAAACAGTAAAAGCAGTGGCATACTGAAAGGAAAGGCTTCATGTGCTGGAAAGACAGAGGTTTCAAAGAGTTTCGGGAGTGGGGTGCAAGGGGCTGAAAAAAACAAACTATTTTTCTTTGAAGGTTCCTCTCATAGCTTTGACCTTGAGGATTTGCTGAAGGCTTCAGCTGAAGTTCTCGGAAAAGGAAGTTATGGAACAGCATACAAGGCTGTTTTGGAGGAGGGAACAACAGTGGTAGTCAAAAGGTTGAAAGAAGTTGTGGTAGGAAAGAAGGAGTTTGAGCAGCAGTTGGAGATTGTTGGGAGATTTGGAAGCCACCCCAATGTGATGCCTCTAAGGGCTTATTACTATTCCAAAGATGAGAAACTTCTGGTTTACAACTACATGCCAGGTGGAAGCTTGTTTTTCTTGTTACACGGAAACAAGGGTGCAGGAAGAACCCCACTAGACTGGGATTCCAGAGTGAAGATTTTGCATGGAGTTGCCAAGGGAATTGCTTTCATCCACTCCGAGGGAGGTTCAAAATTCACACATGGCAACATCAAGTCAAACAATGTGCTCATAACCCAAGAACTAGACGGCTGCATCTCTGATGTTGGATTGCCACCTCTAATGAACACCCCAGCAACCATGTCTAGAGCCAATGGCTATAGAGCTCCAGAAGTCACTGACTCAAAGAAGATCACTCAGAAGTCTGATGTATACAGTTTTGGTGTGCTGCTGCTTGAAATGCTGACAGGGAAGACCCCACTAAGGTATCCAGGGTATGAGGATGTGGTTGATCTTCCAAGGTGGGTGAGGTCTGTTGTTAGAGAGGAATGGACTGCAGAAGTGTTTGATGAGGAGCTTCTGAGAGGGCAGTATGTGGAAGAGGAAATGGTGCAGATGCTTCAGATTGCATTAGCATGTGTAGCTAAAGGGTCAGATAACAGGCCTAGAATGGATGAAGTTGTTAGAATGATTGAGGAAATTAAGCATCCCGAGTTGAAGAACCGGCCATCCTCTGAGTCAGAGTCTAATGTGCACACACCTTGA 1920 0.4443 MKLQFSIVALFLLGSTLSLCGLIVADLKSDQQALLEFASSVPHAPRLNWKNDSASICISWVGVACNSNGTRVTGLHLPGMGLTGTIPENSVEKLDALRVLSLHSNGLRGNLPHNILSIPSLQFVYLQHNNFSGVIPSPVSPKLFALDISFNSFSGSIPSAFQNLRRLTWLYLQNNSISGDIPDFNLPSLKQLNLSYNNLNGSIPNSIKTFPYSSFVGNSHLCGPPLNDCSTITPSPSPSTDDYQPLTPPTTQNQKGTNHKKSFGLATILALVIGVFAFLSLLVVVICVFCLKRKKNSKSSGILKGKASCAGKTEVSKSFGSGVQGAEKNKLFFFEGSSHSFDLEDLLKASAEVLGKGSYGTAYKAVLEEGTTVVVKRLKEVVVGKKEFEQQLEIVGRFGSHPNVMPLRAYYYSKDEKLLVYNYMPGGSLFFLLHGNKGAGRTPLDWDSRVKILHGVAKGIAFIHSEGGSKFTHGNIKSNNVLITQELDGCISDVGLPPLMNTPATMSRANGYRAPEVTDSKKITQKSDVYSFGVLLLEMLTGKTPLRYPGYEDVVDLPRWVRSVVREEWTAEVFDEELLRGQYVEEEMVQMLQIALACVAKGSDNRPRMDEVVRMIEEIKHPELKNRPSSESESNVHTP* 640
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g01235 639 SUPERFAMILY Protein kinase-like (PK-like) 352 619 IPR011009 -
Lapu9g01235 639 Pfam Leucine Rich Repeat 144 164 IPR001611 GO:0005515
Lapu9g01235 639 Gene3D Phosphorylase Kinase; domain 1 314 423 - -
Lapu9g01235 639 SUPERFAMILY L domain-like 39 226 - -
Lapu9g01235 639 FunFam Probable inactive receptor kinase RLK902 27 184 - -
Lapu9g01235 639 FunFam pollen receptor-like kinase 1 316 423 - -
Lapu9g01235 639 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 424 630 - -
Lapu9g01235 639 ProSitePatterns Protein kinases ATP-binding region signature. 354 385 IPR017441 GO:0005524
Lapu9g01235 639 MobiDBLite consensus disorder prediction 620 639 - -
Lapu9g01235 639 Gene3D Ribonuclease Inhibitor 142 231 IPR032675 -
Lapu9g01235 639 ProSiteProfiles Protein kinase domain profile. 348 624 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu9g01235 639 Pfam Leucine rich repeat N-terminal domain 28 66 IPR013210 -
Lapu9g01235 639 Gene3D Transferase(Phosphotransferase) domain 1 424 637 - -
Lapu9g01235 639 Gene3D Ribonuclease Inhibitor 28 141 IPR032675 -
Lapu9g01235 639 Pfam Protein kinase domain 352 613 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu9g01235 639 PANTHER OS05G0588300 PROTEIN 14 631 - -
Lapu9g01235 639 Pfam Leucine Rich repeats (2 copies) 166 204 IPR025875 -
Lapu9g01235 639 MobiDBLite consensus disorder prediction 233 258 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g01235 Lapu-Chr9 26319418 26324248 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu9g01235 16 634 Receptor kinase-like Gene Family AT5G58300 59.903 0.0 716
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Lapu9g01235 Pkinase 7.8e-35 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g01235 - - gmx:100818444 1144.8