Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g01228 ATGAGAGTTCTTTCCTCTCCAACTTCCTCTCCCATGAGCAAAAGGGTCATCACAGAGCTCGTTCTAGGTCTCGACTATGCCACTCAGCTCAAGTTACTTCTTCAGAACCCTATTGGCCCAGATGGGTCTGTTGCAGCTAAGGAACTCGTGACGAATGTGCAGAGATCTTTCGCCGAAACTCTCTCCATGTTGACTTCTTCCGAGGCTGCAAGAGGTGAAGACGAGGTTGCTCAGAATCTCGTGATTTCCGGGGAAGATGCCTCGCAGGTTGCAAGCATTGATCTCAAGTCTGAGGATTCAACCGAGAGTAGAAAGAGATCGCTGCCCCTCTCCAAGGATCGTAGAGGTTCCTACAAAAGAAGGAAGACTGAACAGACATGGACCATAGTTTCCCAAACTACTGATGATAATCATGCGTGGCGAAAGTACGGACAAAAGGATATTCTAAATTCTCAGTTTCCCAGGAGTTACTTCAGGTGCACTAGGAAGTTTGAACAAGGTTGCAAAGCCACCAAACAGGTGCAACGGTTACAAGAGAATCCTGATATGTACAATATTACGTACATTGGTTTTCACACATGCAAAGACAACCTCAACACTCCACAGATGGCCACCTATTCTGAAACTTGGGACTCATTTCTTGAGAATTCCCATCCAGACTTAAATGTATCAAATGAACAAAAGCAACATGATCCTCCTATCAGATCACAAAGCCCAGCTGTTAAACAAGAATATCCTAATGATGAGACTGATCAGAGTGATTCTGCAGATGCCAACCTGTGGTCTGATTTGAAGGATTTTGAACTGTCCAACGACAAGCCTGCCTCGAAAATATTTGAAACTTCAGATACCGTGTATTCATGGCTGTCGGAGCTTGGACATGGATTTTGA 891 0.4478 MRVLSSPTSSPMSKRVITELVLGLDYATQLKLLLQNPIGPDGSVAAKELVTNVQRSFAETLSMLTSSEAARGEDEVAQNLVISGEDASQVASIDLKSEDSTESRKRSLPLSKDRRGSYKRRKTEQTWTIVSQTTDDNHAWRKYGQKDILNSQFPRSYFRCTRKFEQGCKATKQVQRLQENPDMYNITYIGFHTCKDNLNTPQMATYSETWDSFLENSHPDLNVSNEQKQHDPPIRSQSPAVKQEYPNDETDQSDSADANLWSDLKDFELSNDKPASKIFETSDTVYSWLSELGHGF* 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g01228 296 SUPERFAMILY WRKY DNA-binding domain 131 195 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lapu9g01228 296 MobiDBLite consensus disorder prediction 93 124 - -
Lapu9g01228 296 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 30 217 IPR044810 GO:0003700
Lapu9g01228 296 ProSiteProfiles WRKY domain profile. 135 192 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lapu9g01228 296 MobiDBLite consensus disorder prediction 97 122 - -
Lapu9g01228 296 Pfam WRKY DNA -binding domain 135 195 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lapu9g01228 296 MobiDBLite consensus disorder prediction 217 259 - -
Lapu9g01228 296 Gene3D WRKY domain 119 189 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lapu9g01228 296 SMART WRKY_cls 134 196 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g01228 Lapu-Chr9 26219987 26223076 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu9g01228 15 244 WRKY Transcription Factor Family AT3G56400 41.631 1.15e-50 167
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lapu9g01228 WRKY 1.1e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g01228 - - vun:114164744 478.018