Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g01227 ATGGAAGAGGTAATTAACTTGATTCGACGCGCTTCTGAATTGGTTCAAAGGCTTGAACAAGACCTACCCAACTCGGTGAACCGCCCAGGTATGCTGTCTTTGTCCATTGACGAGATAACTCAGGCATTCACTGCTGCCAAGGAAAAGCTGTTGCTAATTTCCCGACAGAACCAAACCTCGGAATCTCCTCCAATGTTGCTTCATGAAACGACACCGCAGCAGCCCCAGATGGATGCTACTCTAATGCAGGAATGGTTAAGGTCTAGTCATGCAGTCACGATAGATCAGTTGCTTCAAATGCAGCAGCTTCGTGCTGCTAGGAGCACTTTGCAGACTGGTGAAATGGGAGGGAGAGAGGTGGAAGATTCAGAGAGAACCATGGGATCTGAAGGAGATCAAGGGCAAGGAATCCACGCATCTTCTTCACGACCACGAAGAAGAAGCAGGGAAGCTAATCAAGAGAAGAAAAAATTTATGGTTCCCGCCCCACAGTTTGGAAACACAGAGATGCCACCGGAAGATGGTTTCACCTGGAGAAAATATGGCCAGAAAGAAATACTTGGATCCAAGTACCCAAGGAGTTACTACAGATGCACACATCAGAAGTTATATGAATGCCAGGCCAAGAAGATGGTGCAAAGACTTGATCATAATGCTAACATATTTGAAGTAACATACAGAGGGAAACACACATGCTATATCTCCTCCACAGCACCATCATCAGCTCCGCTAGAACAACTTTTGGTGGACATGACACAAAGTAGTAACCCCGTCTCCTCTCAGTTGTCTCCGTCAGTGAATCTCAGCCTCCATCCCAGTTGTGGCACCGCCGCCGGCACTAGTGGCAGGGGGGGAGCCTCCTCCTCAAGATACGGTGGTGATTATCCTGTGGTGGATATGGCTGATGCTATGTTCAACTCTGGTAGCAGCAGCGGCAATAACAGCATGGAATTTCTCTTCTCTCCCGCTGAAGATAAAAGTGATGCAAATTGA 993 0.4763 MEEVINLIRRASELVQRLEQDLPNSVNRPGMLSLSIDEITQAFTAAKEKLLLISRQNQTSESPPMLLHETTPQQPQMDATLMQEWLRSSHAVTIDQLLQMQQLRAARSTLQTGEMGGREVEDSERTMGSEGDQGQGIHASSSRPRRRSREANQEKKKFMVPAPQFGNTEMPPEDGFTWRKYGQKEILGSKYPRSYYRCTHQKLYECQAKKMVQRLDHNANIFEVTYRGKHTCYISSTAPSSAPLEQLLVDMTQSSNPVSSQLSPSVNLSLHPSCGTAAGTSGRGGASSSRYGGDYPVVDMADAMFNSGSSSGNNSMEFLFSPAEDKSDAN* 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g01227 330 Coils Coil 1 21 - -
Lapu9g01227 330 SUPERFAMILY WRKY DNA-binding domain 169 233 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lapu9g01227 330 MobiDBLite consensus disorder prediction 108 156 - -
Lapu9g01227 330 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 56 254 IPR044810 GO:0003700
Lapu9g01227 330 SMART WRKY_cls 172 234 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lapu9g01227 330 MobiDBLite consensus disorder prediction 310 330 - -
Lapu9g01227 330 ProSiteProfiles WRKY domain profile. 173 235 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lapu9g01227 330 Pfam WRKY DNA -binding domain 173 232 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lapu9g01227 330 Gene3D WRKY domain 162 234 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g01227 Lapu-Chr9 26211051 26213723 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu9g01227 1 327 WRKY Transcription Factor Family AT2G40740 39.286 6.61e-57 184
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lapu9g01227 WRKY 2.5e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g01227 - - pvu:PHAVU_009G043200g 536.954