Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g01226 ATGGCTGCTGGTTCTTCTTCAAATTGGGTCATGGAAACTGCTCATGATGTTCCTCATGTTTTGGCCGTTGATGACAACCTTATTGATAGAAAACTCCTAGAGAAACTCCTCAGGAATTCTTCTTGCAAAGTTACAACTGCAGAAAATGGGCCAAGGGCATTGGAGTTATTGGGCTTGACTAGTGGTGGACAGAACAGTATGAACGGTAGATCCAAAGTAAATTTGGTAATCACAGACTATTGCATGCCAGGAATGACAGGCTATGAGCTACTTAAGAAAATTAAGGAATCATCTGTAATGAAGGAGGTTCCAGTAGTGATAATGTCTTCTGAGTACATACCAACACGGATTAACAAGTGTCTGGAAGAAGGAGCTCAGATGTTCATCTTAAAGCCCCTCAAACAATCTGATGTAAAAAAGCTGACATGTCAGTTAATGAATTGA 444 0.4032 MAAGSSSNWVMETAHDVPHVLAVDDNLIDRKLLEKLLRNSSCKVTTAENGPRALELLGLTSGGQNSMNGRSKVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVIMSSEYIPTRINKCLEEGAQMFILKPLKQSDVKKLTCQLMN* 148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g01226 147 Gene3D - 19 147 - -
Lapu9g01226 147 PANTHER TWO-COMPONENT RESPONSE REGULATOR 18 145 IPR045279 GO:0009736
Lapu9g01226 147 CDD REC_typeA_ARR 20 141 - -
Lapu9g01226 147 SMART REC_2 18 142 IPR001789 GO:0000160
Lapu9g01226 147 Pfam Response regulator receiver domain 20 140 IPR001789 GO:0000160
Lapu9g01226 147 SUPERFAMILY CheY-like 18 145 IPR011006 -
Lapu9g01226 147 ProSiteProfiles Response regulatory domain profile. 19 146 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g01226 Lapu-Chr9 26195114 26196289 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu9g01226 2 147 Response Regulator Gene Family AT3G56380 66.892 1.30e-63 190
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Lapu9g01226 Response_reg 5.6e-22 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g01226 K14492 - gmx:100778707 273.478