Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g01201 ATGGGAAGCGTTGGTAGTATTGGGTTGGGTTCAGTGCTGAAAGTTCCTTTGGATACGCAACTACAGAACAAATCGTTATGCGGATATATGGTTCCTCCTTATCTTAACTACCCTATTAGGCTCACTCCTATATGTTGTAAATTGCCAGAAAGTGGGATTGAGGAGAACCCGATCACCGCAAGCAAGAGGGTTTACAAGACCAAGAACAACAAGAACAGGATGGAGGAGTACAACATGGCTATGAAGAGAATGATGAGGAACCCTTATGAGTATCACCATGATCTGGGTATGAATTATACTCTTATAACGGACAACTTGATTGTGGGCTCTCAACCGCAGAAACCCGAAGACATAGATCACCTAAAAAAAGAAGAGGGTGTGGCATACATTCTAAATTTGCAACAGGACAAGGATGTTGATTACTGGGGAATAGACTTACAGTCAATAAGAAGAAGGTGTCATGAACTTGAAATTAGCCACATGAGGAGACCGGCAAAAGACTTTGATCCAGGGTCCTTGCGAAGTGAACTACCTAAAGCAGTTGCATCCTTAGAATGGGCAATTTCTGAGGGGAAAGGAAGAGTTTATGTACATTGTACTGCAGGGCTTGGAAGAGCTCCAGCAGTGGCAATTACTTATTTGTTCTGGTTTTGTGGCATGAATCTAAATGAAGCGTATGATATGCTAACTTCAAAGAGACCTTGTGGACCAAATAAAACAGCAATACGAGGAGCTACATATGATATGGCTAAGAATGACCCATGCAAGGAGCCATTTGAGAATCTTCCAGAATATGCATTTGAGGATATAGCAGACTGGGAAAGAAACTTGATTCAAAATCGTGTCCGTTCCCTTCGTGAAACTTGA 867 0.4198 MGSVGSIGLGSVLKVPLDTQLQNKSLCGYMVPPYLNYPIRLTPICCKLPESGIEENPITASKRVYKTKNNKNRMEEYNMAMKRMMRNPYEYHHDLGMNYTLITDNLIVGSQPQKPEDIDHLKKEEGVAYILNLQQDKDVDYWGIDLQSIRRRCHELEISHMRRPAKDFDPGSLRSELPKAVASLEWAISEGKGRVYVHCTAGLGRAPAVAITYLFWFCGMNLNEAYDMLTSKRPCGPNKTAIRGATYDMAKNDPCKEPFENLPEYAFEDIADWERNLIQNRVRSLRET* 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g01201 288 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 95 239 IPR029021 -
Lapu9g01201 288 ProSiteProfiles Dual specificity protein phosphatase domain profile. 98 255 IPR020422 GO:0006470|GO:0008138
Lapu9g01201 288 CDD DSP_laforin-like 97 244 IPR045204 GO:0019203
Lapu9g01201 288 Gene3D Protein tyrosine phosphatase superfamily 81 288 IPR029021 -
Lapu9g01201 288 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 175 234 IPR000387 GO:0016311|GO:0016791
Lapu9g01201 288 PANTHER DUAL SPECIFICITY PHOSPHATASE, SUBGROUP, CATALYTIC DOMAIN 61 254 - -
Lapu9g01201 288 Pfam Dual specificity phosphatase, catalytic domain 119 238 IPR000340 GO:0008138|GO:0016311
Lapu9g01201 288 SMART dsp_5 98 240 IPR020422 GO:0006470|GO:0008138
Lapu9g01201 288 FunFam Phosphoglucan phosphatase LSF2, chloroplastic 81 288 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g01201 Lapu-Chr9 25820808 25827269 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu9g01201 35 288 Protein tyrosine phosphatase (PTP) family AT3G10940 74.409 1.54e-139 393
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g01201 - - gmx:100787079 471.47