Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g01197 ATGTCCAGAGAAAGGGAGAGATTTGATGAGATAGGGAAGAAGATCAAGAGGGAAGGAGATGTTTCTTCTCAAATGGGAAGAAGACATATGTTAGGCCCTCCTGGAACCCTAAATACCATCACTCCTTGTGCAGCATGTAAGTTGTTGAGAAGAAGATGTGCCCAAGAATGTCCCTTTTCTCCATATTTCTCTCCGCATGAGCCTCAAAAGTTTGCTTCCGTCCACAAAGTTTTTGGTGCCAGCAACGTCTCAAAGATGCTCATGGAAGTACCAGAGTGTCAGAGAGCCGATGCAGCAAATAGTCTAGTTTATGAGGCTAATGTGAGGCTAAGAGACCCTGTATATGGATGCATGGGTGCAATTTCTGCTTTGCAACAACAAGTTCAATCTTTACAAGCTGAACTTAATGTAGTGAGGGCTGAAATACTTAAATACAAACTCAGGGAGGCTCACATGATACCCTCCTCTCATGTTGCAATGCTTCCTTCATCTGGGGCTGTTTCAATCGCTGCTCCACCTCCACCACCTCCTCCACCACCACCACTTCCACCTCCTTCTATTCCTCAAACTTCTTCCTCCTCTTCCATGTACATCCAACAGAGAGATCCCACCACTTACACCACAATTCCAAGTGATAATATATCCTATTTTGGTTAA 657 0.4444 MSRERERFDEIGKKIKREGDVSSQMGRRHMLGPPGTLNTITPCAACKLLRRRCAQECPFSPYFSPHEPQKFASVHKVFGASNVSKMLMEVPECQRADAANSLVYEANVRLRDPVYGCMGAISALQQQVQSLQAELNVVRAEILKYKLREAHMIPSSHVAMLPSSGAVSIAAPPPPPPPPPPLPPPSIPQTSSSSSMYIQQRDPTTYTTIPSDNISYFG* 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g01197 218 MobiDBLite consensus disorder prediction 169 218 - -
Lapu9g01197 218 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 38 183 - -
Lapu9g01197 218 MobiDBLite consensus disorder prediction 189 218 - -
Lapu9g01197 218 Pfam Lateral organ boundaries (LOB) domain 42 139 IPR004883 -
Lapu9g01197 218 ProSiteProfiles LOB domain profile. 41 142 IPR004883 -
Lapu9g01197 218 MobiDBLite consensus disorder prediction 169 188 - -
Lapu9g01197 218 Coils Coil 121 148 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g01197 Lapu-Chr9 25702431 25704845 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu9g01197 27 169 AS2 family AT2G40470 84.354 7.66e-75 223
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Lapu9g01197 LOB 1.8e-40 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g01197 - - gmx:100786324 367.851
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu9g01197 9 25702431 25704845 Lapu9g01197 9 25702431 25704845 ECH