Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g01196 ATGAATTCCCCACCCGACTTCTTCATCTCGCTTCTTCTCTTCTTCACTATCTTCTCCGCTTCTTCCTCCGCCTCACTCCCGGAGCTCCGATCCCTCATGGAATTCAAGAAGGGGATTACTCAAGATCCGCAGAAGCTTTTAGACTCCTGGACTCCGGCGGCGGTGGCCGAGGCCACCGCCGCCTGTCCTTCTACCTGGCAGGGCATTGTTTGCGACGAAGAGTCCGGCAACGTCACCGGAATCGTCCTCGACCGCCTCCGCCTCGGCGGTGAGCTCAAGTTCCACACTCTCCTCGACCTCAAGATGCTCAGAAACCTCTCGCTCTCCGGCAACGACTTCACCGGAAGGTTGCCTCCCTCCCTGGGGTCTCTCTCCTCGCTCCAGCATTTGGATCTTTCGCAGAACAAGTTCTACGGCCCCATCCCCGCGCGGATCAACGACCTTTGGGGTCTCAATCACCTCAATTTGTCTAACAACCACTTCAAGGGTGGCTTCCCCAGTGGCCTCTCCAACCTTCAGCAGCTCCGAGTTCTCGATTTGCATGCCAATGCTCTCTGGGCCGAAATTGGGGACGTCCTCTCCACGCTCCGGAATGTGGAGCGCGTCGATTTGAGTCGTAACCAGTTCTTTGGCGGACTTTCCCTCACAGTGGAGAATGTTTCTGGACTGGCCAACACAGTGCATTTCCTTAATCTCAGTTACAACAACTTGAACGGTCACTTCTTTAAGAACTCCACCATTGGCCTGTTTCGCAACCTGCAAGTTTTGGACTTGAGTGATAATTCCATCACAGGGGAGCTTCCTTCTTTTGGCTCATTACCCGCACTTCGCGTTCTTAGGCTTCCCCGGAATCAATTGTTTGGCTCCGTGCCCGAGGAGTTGTTGCAGACTTCGGTGCCGCTGGTAGAATTGGATCTTAGCGTCAACGGGTTTACCGGCTCAATCGCTACAGTCAACTCTACAAGTTTAAATATTTTGAATCTTTCATCCAATAGTTTATCAGGCTCCTTGCCAACTTCTTTGAGAAGATGTACTGTCATTGACATGAGCAAGAATATGTTATCTGGTGACATTTCTGTTATACAGAACTGGGAAGCCCCATTGGAGGTTATTAATCTGAGTTCAAACAAGCTGTCAGGATCCTTGCCTCCTACTTTAGGAACCTCTTCAAAATTGTTTACCGTTGATTTTAGTTTAAATGAACTCAAGGGATCCATTCCTCGAGGTTTAGTTACTTCATCATCAGTGACAAGATTGAATCTTTCTGGAAATCAACTTACAGGGCAACTTCTGCTTCAAGGTTCTGGAGCCAGTGAGTTACTCCTTATGCCTCCTTATCAACCAATGGAATATCTTGATGTATCTAATAACTCCTTAGAAGGTGCCTTGCCTTCTGAAATAGATAGGATGAGTGTGCTCAAACTGCTGAATGTGGCTAGGAATGAGTTTTCTGGACCACTGCCAAGTGAATTGAACAAACTTCTTTATTTGGAGTACCTTGATTTGTCTAACAACAAGTTTTCTGGAAATATTCCTGATAAGCTTTCGTCCAGCTTAACTGTATTTAACGTGTCCAATAATGACCTATCTGGTCGAGTTCCTGAAAATTTGCGGCAGTTCTCTCCTTCATCCTTTCGCCCTGGAAATGGAAAGTTAATGTTACCAAATGATTCTCCGGAGACTTCATCAGTGCCTGACAATATTCCAGATAATCGTAGACATCATAGTTCAAAGGGTAATATCAGAATAGCAATTATTCTTGCCTCAGTGGGTGCTGCTATCATGATTGCTTTTGTTTTATTGGCTTATCATAGAACACAGCTAAAAGAATTTCATGGAAGAAGTGAGTTCACTGGTCAAAATACCAGAAGAGATGTCAAGTTAGGAGGACTTTCGAGGTCTTCCCTCTTCAAGTTCAACACAAATGTTCAACCTCCAACAACTTCATTGAGCTTTTCAAATGACCACCTTCTGACTTCCAATTCGAGGTCACTCTCTGGTGGACAGTCAGAGTTTATAACTGAAATTTCTGAGCACGGCTTAACTCAGGGCATGGTGGCTACTAGTTCAGCATCTGTAAATCCCAATTTGATGGATAATCCTCCCACTTCATCTGGAAGGAAGTCTTCTCCTGGTTCCCCATTGTCGTCGTCACCCCGTTTCATAGAGGCTTGTGAAAAGCCAGTGATGTTGGATGTTTACTCACCAGATCGGTTGGCTGGCGAATTGTTTTTCCTGGATTCTTCCCTAGCATTCACTGCAGAGGAATTATCTCGAGCCCCAGCTGAAGTTCTTGGCAGAAGTAGCCATGGCACTTTATATAAAGCAACTTTGGATAGTGGTCATATGTTGACTGTAAAATGGTTACGGGTGGGATTGGTGAAACACAAAAAGGAATTTGCTAGAGAAGTTAAAAGGATTGGTTCTATGAGGCATCCAAACATTGTCTCGTTACTAGCATACTATTGGGGGCCTAGGGAACAAGAAAGGCTTCTTTTAGCTGACTATATACATGGGGACAACTTGGCCCTTCATCTCTATGAGAGCACACCCCGGAGGTACTCCCCATTATCATTCAGCCAAAGAATAAGAGTTGCTGTTGATGTTGCGCGATGTCTTCTATACCTTCATGACCGAGGACTTCCCCATGGCAATCTGAAGCCCACGAATATAGTGTTAGCTGGCCCTGATTTCAATGCTCGTCTTACTGATTATGGTCTGCACCGACTGATGACGCCGGCTGGAATTGCAGAGCAAATACTCAATCTTGGAGCACTTGGATACCGTGCTCCGGAACTTGCTACAGCATCCAAACCGGTTCCATCCTTTAAGGCCGATGTGTATGCTATTGGTGTGATCCTAATGGAATTGTTGACAAGAAAAAGTGCTGGTGACATAATATCAGGGCAGTCAGGTGCTGTTGATCTTACAGATTGGGTTAGGCTGTGTGAGCGAGAAGGAAGGGTAATGGACTGTATTGACAGAGACATTGCAGGTGGGGAAGAATCCTCCAAAGAGATGGATGAACTGCTTGCAATCTCTCTCAGGTGTATTCTCCCTGTAAATGAGAGGCCTAACATCAGACAAGTTTTTGACGATCTGTGTTCAATATCCGTTTGA 3120 0.4609 MNSPPDFFISLLLFFTIFSASSSASLPELRSLMEFKKGITQDPQKLLDSWTPAAVAEATAACPSTWQGIVCDEESGNVTGIVLDRLRLGGELKFHTLLDLKMLRNLSLSGNDFTGRLPPSLGSLSSLQHLDLSQNKFYGPIPARINDLWGLNHLNLSNNHFKGGFPSGLSNLQQLRVLDLHANALWAEIGDVLSTLRNVERVDLSRNQFFGGLSLTVENVSGLANTVHFLNLSYNNLNGHFFKNSTIGLFRNLQVLDLSDNSITGELPSFGSLPALRVLRLPRNQLFGSVPEELLQTSVPLVELDLSVNGFTGSIATVNSTSLNILNLSSNSLSGSLPTSLRRCTVIDMSKNMLSGDISVIQNWEAPLEVINLSSNKLSGSLPPTLGTSSKLFTVDFSLNELKGSIPRGLVTSSSVTRLNLSGNQLTGQLLLQGSGASELLLMPPYQPMEYLDVSNNSLEGALPSEIDRMSVLKLLNVARNEFSGPLPSELNKLLYLEYLDLSNNKFSGNIPDKLSSSLTVFNVSNNDLSGRVPENLRQFSPSSFRPGNGKLMLPNDSPETSSVPDNIPDNRRHHSSKGNIRIAIILASVGAAIMIAFVLLAYHRTQLKEFHGRSEFTGQNTRRDVKLGGLSRSSLFKFNTNVQPPTTSLSFSNDHLLTSNSRSLSGGQSEFITEISEHGLTQGMVATSSASVNPNLMDNPPTSSGRKSSPGSPLSSSPRFIEACEKPVMLDVYSPDRLAGELFFLDSSLAFTAEELSRAPAEVLGRSSHGTLYKATLDSGHMLTVKWLRVGLVKHKKEFAREVKRIGSMRHPNIVSLLAYYWGPREQERLLLADYIHGDNLALHLYESTPRRYSPLSFSQRIRVAVDVARCLLYLHDRGLPHGNLKPTNIVLAGPDFNARLTDYGLHRLMTPAGIAEQILNLGALGYRAPELATASKPVPSFKADVYAIGVILMELLTRKSAGDIISGQSGAVDLTDWVRLCEREGRVMDCIDRDIAGGEESSKEMDELLAISLRCILPVNERPNIRQVFDDLCSISV* 1040
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g01196 1039 Gene3D Transferase(Phosphotransferase) domain 1 838 1039 - -
Lapu9g01196 1039 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 226 439 - -
Lapu9g01196 1039 Gene3D Ribonuclease Inhibitor 28 186 IPR032675 -
Lapu9g01196 1039 Gene3D Ribonuclease Inhibitor 298 562 IPR032675 -
Lapu9g01196 1039 Gene3D Ribonuclease Inhibitor 187 297 IPR032675 -
Lapu9g01196 1039 ProSiteProfiles Leucine-rich repeat profile. 252 274 IPR001611 GO:0005515
Lapu9g01196 1039 MobiDBLite consensus disorder prediction 691 717 - -
Lapu9g01196 1039 FunFam Leucine-rich repeat receptor-like protein kinase 744 836 - -
Lapu9g01196 1039 SUPERFAMILY RNI-like 320 539 - -
Lapu9g01196 1039 FunFam Leucine-rich repeat receptor protein kinase EMS1 442 536 - -
Lapu9g01196 1039 PANTHER OS07G0626500 PROTEIN 369 1037 - -
Lapu9g01196 1039 Pfam Leucine rich repeat N-terminal domain 28 72 IPR013210 -
Lapu9g01196 1039 SUPERFAMILY Protein kinase-like (PK-like) 762 1034 IPR011009 -
Lapu9g01196 1039 Pfam Leucine Rich Repeat 252 269 IPR001611 GO:0005515
Lapu9g01196 1039 SUPERFAMILY L domain-like 62 358 - -
Lapu9g01196 1039 ProSiteProfiles Protein kinase domain profile. 759 1039 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu9g01196 1039 Gene3D Phosphorylase Kinase; domain 1 740 836 - -
Lapu9g01196 1039 MobiDBLite consensus disorder prediction 533 575 - -
Lapu9g01196 1039 SMART LRR_typ_2 124 148 IPR003591 -
Lapu9g01196 1039 SMART LRR_typ_2 273 297 IPR003591 -
Lapu9g01196 1039 SMART LRR_typ_2 494 518 IPR003591 -
Lapu9g01196 1039 SMART LRR_typ_2 250 272 IPR003591 -
Lapu9g01196 1039 SMART LRR_typ_2 172 196 IPR003591 -
Lapu9g01196 1039 Pfam Protein kinase domain 763 1030 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu9g01196 1039 FunFam Pollen receptor-like kinase 1 837 1039 - -
Lapu9g01196 1039 MobiDBLite consensus disorder prediction 691 719 - -
Lapu9g01196 1039 FunFam Nuclear pore complex protein NUP107 25 191 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g01196 Lapu-Chr9 25683057 25688106 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu9g01196 15 616 Receptor kinase-like Gene Family AT5G62230 32.459 9.29e-60 219
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Lapu9g01196 Pkinase 5e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g01196 - - gmx:100802768 1797.71