Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g01180 ATGGAATACTATTTTCAAAACCCTAATTTCCGTCACTCAGACGTCTTCAACATGGCAGCATCTCCCTCCTCTGAGTTCATGTTATCTGATTATCTCGCTTTGGATGATGCTGTTGAGTATCATCATGAAGAGTGTTGTTGGTCACAAAGCACTGAAACTGAATCATGGGAGAAAGCAACCTCCAGCGATGCCAGCCATGGATTTGGTGATGCAACCTCCACCACCACCACCACCAAAAAGTGCAAAGATAAAGGGATTAAGCGAAAGAAGGCAGAAGTGAGTCAAAGTATCACGTTTAGAACCAGATCGCAGCTTGAGATTATGGATGATGGATATAAATGGAGGAAATACGGAAAGAAGTCAGTGAAGAACAATTCAAACCCAAGGAACTACTACAAGTGTTCAGGTGAAGGATGCAGTGTGAAGAAAAGGGTGGAAAGGGACAGAGATGACTCCAGCTATGTTCTAACAACGTATATTGGTGTCCACAATCACAACACCCCGTCTTCCTATTACACCCAAATGCCTTTGCTACATTCTAATGATTGGAACCTTCACCCTTCTGCAACTTCAAACTCTTCCTAG 585 0.4308 MEYYFQNPNFRHSDVFNMAASPSSEFMLSDYLALDDAVEYHHEECCWSQSTETESWEKATSSDASHGFGDATSTTTTTKKCKDKGIKRKKAEVSQSITFRTRSQLEIMDDGYKWRKYGKKSVKNNSNPRNYYKCSGEGCSVKKRVERDRDDSSYVLTTYIGVHNHNTPSSYYTQMPLLHSNDWNLHPSATSNSS* 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g01180 194 SMART WRKY_cls 108 167 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lapu9g01180 194 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 58 172 IPR044810 GO:0003700
Lapu9g01180 194 Pfam WRKY DNA -binding domain 109 165 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lapu9g01180 194 FunFam WRKY transcription factor 57 94 168 - -
Lapu9g01180 194 ProSiteProfiles WRKY domain profile. 103 168 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lapu9g01180 194 MobiDBLite consensus disorder prediction 58 77 - -
Lapu9g01180 194 SUPERFAMILY WRKY DNA-binding domain 100 168 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lapu9g01180 194 Gene3D WRKY domain 91 169 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g01180 Lapu-Chr9 25483769 25486396 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu9g01180 69 186 WRKY Transcription Factor Family AT5G64810 57.377 9.73e-44 142
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lapu9g01180 WRKY 1.9e-22 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g01180 - - gmx:100127396 284.648
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu9g01180 9 25483769 25486396 Lapu9g01180 9 25483769 25486396 ECH
Lapu8g00600 8 23630624 23636364 Lapu9g01180 9 25483769 25486396 PCT