Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g01177 ATGATGTCAACAACGTCTCAAACTAGTGTTAACCATAGCTTGTTTGAAGAGCAAGATCAGATCCCTACGCACATGGGGTTCAATATTCCTTTTCCACCAAACCAGGCCTTCCCTCCTTTGGGTTGCCATCAATCTTTGAAATCCATGAGTGCAATAGTTCCTTCACTTTCATCTGAACCTGCTTCTTCTGCGGCGAATTTTGCTGAAACCCTATTTTCAACCGCTGTTCAAAGACCGCGAGAAGATCTGACTTCAAGTTTGGTAGGAGGAGGAGGACAACTCCTTTCCTTGAACAGATCGAGAGTGAATCCATGGGCATGGGAAGAAGTAACCGATTGCTTGATGAGTAAAAGAATGGGAGGAGATGATAATCATCATCTAGGGGTTTCTGCCATGAAGATGAAGAAAATGAAGGCAAGGAGAAAGGTGCGGGAGCCAAGGTTTTGCTTCAAGACTATGAGCGATGTGGATGTGTTGGATGATGGCTACAAGTGGAGGAAGTACGGACAGAAAGTGGTAAAGAATACACAGCACCCAAGAAGCTACTACCGTTGCACCCAAGATAACTGTCGAGTGAAGAAACGCGTGGAGCGGTTGGCGGAGGATCCGAGGATGGTGATAACCACATATGAAGGGAGACATGTTCACTCGCCGTCAAATGAACTTGAAGACTCACAATCTCCTTCTGAACTTAGTTGCTTGTGGTAG 708 0.4576 MMSTTSQTSVNHSLFEEQDQIPTHMGFNIPFPPNQAFPPLGCHQSLKSMSAIVPSLSSEPASSAANFAETLFSTAVQRPREDLTSSLVGGGGQLLSLNRSRVNPWAWEEVTDCLMSKRMGGDDNHHLGVSAMKMKKMKARRKVREPRFCFKTMSDVDVLDDGYKWRKYGQKVVKNTQHPRSYYRCTQDNCRVKKRVERLAEDPRMVITTYEGRHVHSPSNELEDSQSPSELSCLW* 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g01177 235 SMART WRKY_cls 159 218 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lapu9g01177 235 Pfam WRKY DNA -binding domain 160 216 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lapu9g01177 235 ProSiteProfiles WRKY domain profile. 154 219 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lapu9g01177 235 MobiDBLite consensus disorder prediction 216 235 - -
Lapu9g01177 235 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 96 220 IPR044810 GO:0003700
Lapu9g01177 235 Gene3D WRKY domain 146 212 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lapu9g01177 235 FunFam WRKY transcription factor 57 145 219 - -
Lapu9g01177 235 MobiDBLite consensus disorder prediction 221 235 - -
Lapu9g01177 235 SUPERFAMILY WRKY DNA-binding domain 151 218 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g01177 Lapu-Chr9 25447683 25451640 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu9g01177 43 224 WRKY Transcription Factor Family AT4G39410 50.655 8.08e-61 191
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lapu9g01177 WRKY 1e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g01177 - - gmx:100127389 392.889
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu9g01177 9 25447683 25451640 Lapu9g01177 9 25447683 25451640 ECH