Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g01176 ATGAAAGCCCTGTACAGAGGCTCTCTCTTTCTCATATCCTCCCTCACCTTACTCTTTCTAGGGAGAGCTTCTTCTTCTCTACTTCCCACCAGAGACCCTTCTCAGCAACTCCTCAGCTTCAAAGCTTCTCTCCCCAACCCATCCCTGCTCCCCAACTGGCTCCCCAACCAACCCCCCTGCTCCTTCACCGGTATCACCTGCAACCAGACCCACCTCACTTCCATAGACCTCACCTCCATCCCTCTCAGCACCAACTTCTCCATTGTAGCCACCTACCTCCTCACCCTAGACCACCTTCAGTTCCTCTCTCTTAAATCCACCAACCTTACCGGTCCCTCCACCATTCCCCTTTCTCATTCCAAGTGCGCCTCCTCCCTAACCGCCATAGATCTGTCCCAGAACACCCTCTCCGGTTCTCTCAACGACATGTCCTTTCTTGCTTCCTGTTCAAACCTTCAATCTCTCAACCTTTCTAGTAACCTCCTCGAATTCAACTCTTCTCACTGGAAACTCAATCTCCGTGTCGTCGACCTCTCCAACAACAAGATTTCCGGTCCTGGTGTTGTGCTTTGGCTTCTCAACCCCGACATCGAACACCTGGCACTCAAAGGTAACAAAATCACTGGAGAAACTGACTTCTCGGGTTCGCCTTCTCTGCAGCACTTGGACCTTTCCTCCAATAACTTCTCCGTTCCGATTCCTTCCTTGGGTGAGTGTTCCTCACTGACATACTTGGACCTCTCTGCCAACAAATACTTTGGCGACATTGCACGCACTCTCTCCCCTTGCAAGACTCTTGTCTACCTCAACGTGTCCAGTAACCAGTTTTCCGGTCAGGTTCCTTCCCTCCCTCTTGGTTCCCTCCAGTTCGTCTACCTTGCAGCCAACCACTTCCATGGCCCGATTCCTCCTGTTGTGGGAGACCTCTGCTCCACTCTCCTCCAGCTGGATCTCTCTTCCAACAATCTCACCGGTGACCTACCCCGCACCTTTGGCGCGTGCACTTCCCTTCAGTCCTTGGACATTTCGAGCAACGTCTTTTCTGGTGCTTTGCCGATGGAGGTTCTGACTCAAATGAGCAGTCTGAGGGAGCTTGCGGTTGCCTTCAATGATTTCGGCGGTCCTCTCCCCATGTCACTGTCGAGGCTTTCCAGTTTGGAATTGCTGGATCTGAGTTCCAACCACTTCAGCGGGTCAATCCCTGGAACAACGCTGTGTGGAGATGCTGGGAATAACTTAAAGGAACTTTACCTGCAGAATAACCGATTCACGGGTTTTATTCCTCCTACGCTCAGCAACTGTTCCAACCTGATTGCTTTGGACTTGAGCTTCAACTTTCTCACTGGGACCATCCCTCCAAGCCTAGGGTCACTCTCCAAACTTCGGGACTTGATTATCTGGCTGAACCAGCTCCACGGAGAGATACCTCAGGAGCTTATGTATCTTAAGAGCCTCGAGAATCTTATCCTGGATTTCAACGAGTTGAGTGGAAACATTCCCTCTGGCCTCGTTAACTGCACCAAGCTCAATTGGATCTCTCTCTCCAACAACAGGCTCAGCGGGGATATACCTGCCTGGATTGGCAAGCTTTCCAATCTGGCCATACTCAAGCTCAGTAATAATTCCTTCTCTGGCCGGATTCCCCCGGAGCTTGGCGATTGCACTAGCCTGATATGGTTGGATCTGAACACTAACTCACTCACGGGACCCATTCCGCCAGAGCTGGCCAAGCAGTCTGGTAATATAGCCGTGAATTTCATCAATGGAAAGACGTATGTCTATATAAAGAACGATGGGAGTAAAGAGTGCCATGGAGCGGGGAACTTGCTGGAGTTTGCAGGGATCAGTCAGAAGCAGCTCAACAGGATTTCGACCAAGAACCCCTGCAATTTCACCAGGGTTTATGGAGGTAAGTTGCAGCCAACGTTTAACCATAATGGTTCTATGATATTTTTGGATATCTCGCACAACATGTTGTCAGGCAGTATTCCAAAGGAACTTGGGGCTATGTACTATTTGACCATTCTCAATCTTGGCCACAATAATATGTCTGGGAGCATTCCTCAGGAGCTTGGGAAGGTGAAGAATCTCAACATTCTTGATCTCTCGAATAATAGACTGGAAGGGCAAATCCCGCAGAGCCTTACTGGGCTCTCCATGCTCACTGAGATTGACTTGTCCAACAACATGCTTTCGGGGACCATCCCTGAGACGGGTCAATTTGATACTTTCCCTGCCGCAAGGTTTCAGAACAACTCTGGTCTCTGTGGAGTTCCTCTGTCCCCTTGTGGGTCGGACTCGGCAAACAGTGCGGGTGCACAGCACATGAAGTCTCACAGGAGACAGGCTTCTCTGGCGGGGAGTGTGGCCATGGGATTGTTATTCTCCCTCTTCTGCATCTTTGGTTTGATCATAATTGCCATTGAGACCAGAAAGAGGAGGAAGAAGAAGGAAGCTGCTCTTGAAGCCTACATGGACGGTAATTCGCATTCGGGTCCAGCAAATGTGAGCTGGAAGCACACCAGTACTCGGGAAGCGCTTAGCATAAACCTTGCAACATTTGAGAAGCCCCTGAGGAAGCTTACTTTCGCGGACCTTCTTGATGCCACCAATGGCTTTCACAATGACAGTCTCATCGGTTCTGGCGGGTTTGGGGACGTGTACAAGGCTCAGTTGAAGGACGGAAGTGTTGTGGCCATCAAGAAGCTGATCCATGTCAGCGGACAAGGGGACAGAGAGTTCACTGCTGAAATGGAGACCATTGGGAAAATCAAGCACAGGAACCTTGTTCCCTTGCTGGGATACTGCAAGGTTGGGGAGGAGAGGCTCTTGGTTTATGAGTATATGAAATACGGGAGCTTAGAGGATGTTCTGCATGATCAGAAGAAAGCTGGGATAAAGCTGAACTGGTCCATTAGGAGGAAAATTGCCATTGGAGCTGCTAGGGGATTGGCTTTTCTTCACCACAATTGTATCCCTCACATCATTCATAGAGACATGAAGTCAAGCAATGTGTTGCTTGATGAAAACCTGGAAGCCAGGGTGTCTGATTTTGGAATGGCTAGGCTCATGAGTGCTATGGATACGCATTTGAGTGTGAGCACACTGGCGGGCACCCCCGGATATGTTCCTCCCGAGTACTATCAGAGCTTCAGATGCTCCACTAAAGGTGATGTCTACAGTTACGGTGTGGTTTTGCTGGAGTTGCTAACTGGGAAAAGGCCAACCGACTCGGCTGATTTTGGTGACAATAATCTTGTTGGATGGGTTAAACAACATGCGAAGCTGAAAATAAGTGATATTTTTGACCCGGAGCTCATGAAGGAAGACCCCAATCTGGAGATGGAGCTTTTGCAGCACCTGAAGATTGCGTGTTCCTGTTTGGATGATCGGCCATGGAGGCGTCCGACGATGATTCAAGTGATGGCAATGTTCAAACAGATTCAGGTGGGATCCGGGATTGATTCTCAGTCAACCATAGCCACCGAAGACGAAGGTTTCAATGCCGTCGAAATGGTGGAGATGAGCATCAAAGAAGCCCCTGAATTGAGCAAGCATTAG 3561 0.4971 MKALYRGSLFLISSLTLLFLGRASSSLLPTRDPSQQLLSFKASLPNPSLLPNWLPNQPPCSFTGITCNQTHLTSIDLTSIPLSTNFSIVATYLLTLDHLQFLSLKSTNLTGPSTIPLSHSKCASSLTAIDLSQNTLSGSLNDMSFLASCSNLQSLNLSSNLLEFNSSHWKLNLRVVDLSNNKISGPGVVLWLLNPDIEHLALKGNKITGETDFSGSPSLQHLDLSSNNFSVPIPSLGECSSLTYLDLSANKYFGDIARTLSPCKTLVYLNVSSNQFSGQVPSLPLGSLQFVYLAANHFHGPIPPVVGDLCSTLLQLDLSSNNLTGDLPRTFGACTSLQSLDISSNVFSGALPMEVLTQMSSLRELAVAFNDFGGPLPMSLSRLSSLELLDLSSNHFSGSIPGTTLCGDAGNNLKELYLQNNRFTGFIPPTLSNCSNLIALDLSFNFLTGTIPPSLGSLSKLRDLIIWLNQLHGEIPQELMYLKSLENLILDFNELSGNIPSGLVNCTKLNWISLSNNRLSGDIPAWIGKLSNLAILKLSNNSFSGRIPPELGDCTSLIWLDLNTNSLTGPIPPELAKQSGNIAVNFINGKTYVYIKNDGSKECHGAGNLLEFAGISQKQLNRISTKNPCNFTRVYGGKLQPTFNHNGSMIFLDISHNMLSGSIPKELGAMYYLTILNLGHNNMSGSIPQELGKVKNLNILDLSNNRLEGQIPQSLTGLSMLTEIDLSNNMLSGTIPETGQFDTFPAARFQNNSGLCGVPLSPCGSDSANSAGAQHMKSHRRQASLAGSVAMGLLFSLFCIFGLIIIAIETRKRRKKKEAALEAYMDGNSHSGPANVSWKHTSTREALSINLATFEKPLRKLTFADLLDATNGFHNDSLIGSGGFGDVYKAQLKDGSVVAIKKLIHVSGQGDREFTAEMETIGKIKHRNLVPLLGYCKVGEERLLVYEYMKYGSLEDVLHDQKKAGIKLNWSIRRKIAIGAARGLAFLHHNCIPHIIHRDMKSSNVLLDENLEARVSDFGMARLMSAMDTHLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTDSADFGDNNLVGWVKQHAKLKISDIFDPELMKEDPNLEMELLQHLKIACSCLDDRPWRRPTMIQVMAMFKQIQVGSGIDSQSTIATEDEGFNAVEMVEMSIKEAPELSKH* 1187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g01176 1186 CDD STKc_IRAK 879 1148 - -
Lapu9g01176 1186 Pfam Brassinosteroid receptor island domain 580 644 IPR045381 -
Lapu9g01176 1186 ProSiteProfiles Leucine-rich repeat profile. 218 240 IPR001611 GO:0005515
Lapu9g01176 1186 Pfam Protein kinase domain 873 1143 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu9g01176 1186 FunFam Receptor-like protein kinase 7 234 479 - -
Lapu9g01176 1186 Pfam Leucine rich repeat 673 731 IPR001611 GO:0005515
Lapu9g01176 1186 Pfam Leucine rich repeat 508 567 IPR001611 GO:0005515
Lapu9g01176 1186 Pfam Leucine rich repeat 313 371 IPR001611 GO:0005515
Lapu9g01176 1186 Pfam Leucine rich repeat 412 469 IPR001611 GO:0005515
Lapu9g01176 1186 PRINTS Leucine-rich repeat signature 694 707 - -
Lapu9g01176 1186 PRINTS Leucine-rich repeat signature 313 326 - -
Lapu9g01176 1186 Gene3D Ribonuclease Inhibitor 37 763 IPR032675 -
Lapu9g01176 1186 SUPERFAMILY Protein kinase-like (PK-like) 859 1151 IPR011009 -
Lapu9g01176 1186 FunFam Serine/threonine-protein kinase BRI1-like 1 587 644 - -
Lapu9g01176 1186 Gene3D Transferase(Phosphotransferase) domain 1 949 1150 - -
Lapu9g01176 1186 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 285 1144 - -
Lapu9g01176 1186 SUPERFAMILY L domain-like 52 209 - -
Lapu9g01176 1186 ProSitePatterns Serine/Threonine protein kinases active-site signature. 995 1007 IPR008271 GO:0004672|GO:0006468
Lapu9g01176 1186 Pfam Leucine Rich repeat 172 188 IPR001611 GO:0005515
Lapu9g01176 1186 SMART LRR_typ_2 718 741 IPR003591 -
Lapu9g01176 1186 SMART LRR_typ_2 530 554 IPR003591 -
Lapu9g01176 1186 SMART LRR_typ_2 694 717 IPR003591 -
Lapu9g01176 1186 SMART LRR_typ_2 383 407 IPR003591 -
Lapu9g01176 1186 SMART LRR_typ_2 482 506 IPR003591 -
Lapu9g01176 1186 SMART LRR_typ_2 412 434 IPR003591 -
Lapu9g01176 1186 SUPERFAMILY L domain-like 171 402 - -
Lapu9g01176 1186 Gene3D - 585 645 - -
Lapu9g01176 1186 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 480 571 - -
Lapu9g01176 1186 FunFam serine/threonine-protein kinase BRI1-like 2 834 948 - -
Lapu9g01176 1186 ProSitePatterns Protein kinases ATP-binding region signature. 879 902 IPR017441 GO:0005524
Lapu9g01176 1186 FunFam Brassinosteroid LRR receptor kinase 949 1150 - -
Lapu9g01176 1186 Gene3D Phosphorylase Kinase; domain 1 834 948 - -
Lapu9g01176 1186 Pfam Leucine Rich repeats (2 copies) 217 256 IPR025875 -
Lapu9g01176 1186 SMART serkin_6 873 1145 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu9g01176 1186 ProSiteProfiles Protein kinase domain profile. 873 1150 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu9g01176 1186 SUPERFAMILY L domain-like 411 763 - -
Lapu9g01176 1186 Pfam Leucine rich repeat N-terminal domain 35 68 IPR013210 -
Lapu9g01176 1186 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 641 763 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g01176 Lapu-Chr9 25417063 25421134 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu9g01176 35 1182 Receptor kinase-like Gene Family AT4G39400 69.158 0.0 1528
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xb-1 Lapu9g01176 Pkinase 9.6e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g01176 K13415 - gmx:100499629 2004.56