Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g01162 ATGGGTGAACTAAAGCCATATTTGGCAATGTTTATAGTACAATTAATATATTCAGGGCTAACCTTGCTGTCCAAGGCTGCGTTTAACGGGGGAATGAATACCTTTGTGTTTATCTTCTATAGACAGTTGACTGGTGCAGTTACTTTGGTTCCTCTGGCCTTGATACTTGAAGAAAAAAGGGAAGTGTCAGTGTCACTATCATTTTTTACCTTCTGCAAGATTTTTGTGTCTTCATTTTTCGGACTCACTTTGACTCTAAATATGCAAGCTACTGCCCTTGTTTACACGTCTGCCACTTTGGCTGCTGCAATTGTCAATTCCGTCCCTGCATCTACGTTTTTCTTCGCTGTGCTGTTCAGAATGGAGAAGGTAAATATAAGGACAAAAAGTGGAATTACAAAGATAGGAAGTGTATTTCTGTGCTTGGTTGGTGTAGCCACCCTAGCATTTTACAAGGGACCGCAGTTAAGGATTGCGCATTACCACAATCACCACATTCCACATCATGAAGATCATTTTTCATCTGGCAAAAGATGGATATTGGGTTCTTTACTCTTGTTCTTAAGCGTTATCATCTGGAGCCTTTGGCTTGTAATTCAGGCTCAAATTCTTAAAAGCTACCCTTCAAAGCTGAAGGTCACGAGCCTTCAGTGCCTATCAAGTTCAATCCAGTCATTTGGTATTGCTGTAGCTTTTGAAAGAGATATTCAGCAGTGGAAGTTGGGTTGGGACATGAGACTGCTTGCTGTTGTTTACTGTGGGACACTAGTGACTGGGCTCGGTTACTACTTGCAAGCTTGGGCTATCCAAAAGAGAGGACCAGTTTTTCCCGCGATGTGGAACCCACTAAGTTTTGTCATCGCTACCACAGGTTCCATATTTCTCTTGGGCGAGCCCCTACGTTTGGGAAGTGTTCTTGGAGGTATTGTGCTGATTTTAAGCCTCTACAGTGTTTTGTGGGCGAAAAGCAAAGAAGGAATGACTCATCATCAGAATTCTTTACCCATTAAAGAATGCTCAGAGATGAAAACTGAGGCAACTAACATGGAACCACAGTAA 1059 0.4212 MGELKPYLAMFIVQLIYSGLTLLSKAAFNGGMNTFVFIFYRQLTGAVTLVPLALILEEKREVSVSLSFFTFCKIFVSSFFGLTLTLNMQATALVYTSATLAAAIVNSVPASTFFFAVLFRMEKVNIRTKSGITKIGSVFLCLVGVATLAFYKGPQLRIAHYHNHHIPHHEDHFSSGKRWILGSLLLFLSVIIWSLWLVIQAQILKSYPSKLKVTSLQCLSSSIQSFGIAVAFERDIQQWKLGWDMRLLAVVYCGTLVTGLGYYLQAWAIQKRGPVFPAMWNPLSFVIATTGSIFLLGEPLRLGSVLGGIVLILSLYSVLWAKSKEGMTHHQNSLPIKECSEMKTEATNMEPQ* 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g01162 352 SUPERFAMILY Multidrug resistance efflux transporter EmrE 40 152 - -
Lapu9g01162 352 SUPERFAMILY Multidrug resistance efflux transporter EmrE 241 323 - -
Lapu9g01162 352 Pfam EamA-like transporter family 5 133 IPR000620 GO:0016020
Lapu9g01162 352 Pfam EamA-like transporter family 181 319 IPR000620 GO:0016020
Lapu9g01162 352 PANTHER WAT1-RELATED PROTEIN 6 326 IPR030184 GO:0016020|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g01162 Lapu-Chr9 25154772 25161518 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu9g01162 1 253 Nodulin-like Gene Family AT5G64700 51.538 8.61e-78 238
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g01162 - - vun:114162763 555.444
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu9g01162 9 25154772 25161518 Lapu9g01162 9 25154772 25161518 ECH