Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g01153 ATGCCGCCGGCGAAGAGGGGAAAAGCAAAGGCGGAGCCTAGGGCAACGCCGCCGCCGGAGAAACCTAACAATTTTCCGTCTTGTATTCGCTTCGTGCCTCCTTCCTCCGTCGCCGTAACCATCCACGCCAAACCTGGTTCCAAATCTGCATCCGTAACCGATATTAGCGATGAAGCGGTGGGAGTTCAAATTGACGCACCTGCCAGGGATGGCGAAGCAAATGCGGCTCTTCTCGATTTCATTAGTTCTATGAGTTTGGTAGGAACAGAAGGCTCAGAGGAGGGTGCAGGCCTTCTAGAGCCTCCTGATCCCAATATTGTTGAAATTGATCCTACTAATCGCTACATTAGGTATAAAGACGTTATCGGTCAAGGAGCTTTCAAGACTGTGGTCGGTCTAATGGTGCATGATTGGGTAGTTTACATGAGTTACAAGGCATTTGATGAAATTAATGGACTTGAAGTTGCATGGAGCCAAATTCATATTGATGAGGTATTACAGTCACCTGGTGGCCCAGATAGGTTGTACTCAGAAGTGCATCTCTTGAAGTCACTAAAGCACGATAACATCTTAACTTTCCATAATTCTTGGATTGATGACAAGCATAGGACTATGAACTTGATTACTGAGTTATTCACCTCAGGGAACCTCAGACAGTACAGCAAGAAACACAGGAAGGTTGACATGAAGGCTGTTAAAGGATGGGCAAGGCAAATTTTAAATGGTTTAAACTATCTTCACAGTCACAACCCACCTATTATGCACAGGGACCTGAAATGCGATAATATATTTATCAATGGTCACCGAGGAGAAGTTAAAATTGGAGATCTAGGGTTGGCAACTCTATTAAAACAAACTAATGCCAAGAGTGTAATTGGAACCCCGGAGTTCATGGCACCTGAACTGTATGATGAACATTATAATGAATTAGTGGACATATATTCTTTTGGGATGTGCATGCTTGAGTTGGTTACGTCTGAATATCCTTACAGTGAATGTAGAAACTCAGCTCAGATATACAAGAAAGTTTCATCTGTGCGTATTCTTATTGACAAAGGCATAAAACCTGTTGCTCTTTCTAAACTCAAAAATGCAGACGTAAAATCATTTATTGAGAAATGTCTTGTCCCAGCTCCTCAAAGATTGTCAGCAAAAGAGCTTTTGATGGACCATTTTCTTCAAGTGAATGGTTCATTGAAGAATCGTCGTCTTCCATTACCAGATATCGTTCTTCCTAAATATGGAGCCTTTGAAAATCGTTGTCTTATGTCAGAAGGTCCTGCTAGTACACGTATTAGATCCATTTCAATGGATCTTGGTGATGCCACTGAGCTACCATTAACCACTTTACTTTATAATTCTGTTGATCCTGTTGATCCTGTTGATGATGTTTTGCCTTCTCCATGTGTTGAGATACGAAGGTTAAAGGAAGGTGACATATTTTTTCTAAAAGGTGAACAAAATGATCAAAAGTCTGTGTCATTAGTTCTCCGCATAGCTGATCAAAGTGGGCGTGCAAGAAATATCCACTTCATATTCTACATCAACAGTGATACTGCCATTTCAGTTTCAAGTGAAATGGTTGAGCAACTTGAACTGGCTGAACATAATGTTAAATTCATAGCAGAGTTAATCGATCTATTATTGACAACTTTGCTTCCTGATTGGAAACCTTGTGTAGCAATTGATCATTTAGTTACTTGTAATGGTAAAGTATCTCATCCAACTCAACAAAAAGACTTAGATTTAGCAAAATACACAAGAAGCTCAAGAGATTCTATCCAAATTGTGGCTGAAGATGTTAGTGTCGCCACCTCACGTAGAAGATCAAGAGATAAGGACAACAAAGATAATGTGATTTCTGACAAGGTTTCAACTAATACAAGCATTAGCCTTCAAGGAGAGGCCAACATAGACGACTCTTACTCTGAGATGTCACACACTTCTGCAACATTTGACTTCAACGATAAGCATTTTTCTACAGTTTCGTTCATGTCTGCTAAATCAGGATTTACAGACTTTGACATGCACAAAGTTAATAGTCAAAGCTCACTTGCATCTGAATTCGAGGCTTGTTCTGAATATAGGAATTTTCCACGTGTGGGAAGCTATGGTGCCATGAAATTCTTTAACTACCCTATTAGTGCTCCCTCCGTGTATGAACCTGAGGATGAGTTGAGAATAGAGTTAGAGATGATTGAACAACAATACCAAGAAGCAATTAAAGATTTATCAAAAAGAAGATATCAGGCCATCACCGAGACTAAGAGGAGGTTGTCACAAAAAATTGCAAACTTGAAATAA 2304 0.4006 MPPAKRGKAKAEPRATPPPEKPNNFPSCIRFVPPSSVAVTIHAKPGSKSASVTDISDEAVGVQIDAPARDGEANAALLDFISSMSLVGTEGSEEGAGLLEPPDPNIVEIDPTNRYIRYKDVIGQGAFKTVVGLMVHDWVVYMSYKAFDEINGLEVAWSQIHIDEVLQSPGGPDRLYSEVHLLKSLKHDNILTFHNSWIDDKHRTMNLITELFTSGNLRQYSKKHRKVDMKAVKGWARQILNGLNYLHSHNPPIMHRDLKCDNIFINGHRGEVKIGDLGLATLLKQTNAKSVIGTPEFMAPELYDEHYNELVDIYSFGMCMLELVTSEYPYSECRNSAQIYKKVSSVRILIDKGIKPVALSKLKNADVKSFIEKCLVPAPQRLSAKELLMDHFLQVNGSLKNRRLPLPDIVLPKYGAFENRCLMSEGPASTRIRSISMDLGDATELPLTTLLYNSVDPVDPVDDVLPSPCVEIRRLKEGDIFFLKGEQNDQKSVSLVLRIADQSGRARNIHFIFYINSDTAISVSSEMVEQLELAEHNVKFIAELIDLLLTTLLPDWKPCVAIDHLVTCNGKVSHPTQQKDLDLAKYTRSSRDSIQIVAEDVSVATSRRRSRDKDNKDNVISDKVSTNTSISLQGEANIDDSYSEMSHTSATFDFNDKHFSTVSFMSAKSGFTDFDMHKVNSQSSLASEFEACSEYRNFPRVGSYGAMKFFNYPISAPSVYEPEDELRIELEMIEQQYQEAIKDLSKRRYQAITETKRRLSQKIANLK* 768
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g01153 767 Pfam Protein kinase domain 144 392 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu9g01153 767 Gene3D - 491 570 - -
Lapu9g01153 767 FunFam Probable serine/threonine-protein kinase WNK1 101 210 - -
Lapu9g01153 767 FunFam probable serine/threonine-protein kinase WNK9 212 398 - -
Lapu9g01153 767 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 103 759 - -
Lapu9g01153 767 SUPERFAMILY Protein kinase-like (PK-like) 117 394 IPR011009 -
Lapu9g01153 767 Gene3D - 31 90 IPR036591 -
Lapu9g01153 767 Coils Coil 723 743 - -
Lapu9g01153 767 ProSiteProfiles Protein kinase domain profile. 116 393 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu9g01153 767 Gene3D Phosphorylase Kinase; domain 1 102 210 - -
Lapu9g01153 767 SMART serkin_6 116 393 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu9g01153 767 Gene3D Transferase(Phosphotransferase) domain 1 212 399 - -
Lapu9g01153 767 SUPERFAMILY YggU-like 28 84 IPR036591 -
Lapu9g01153 767 CDD STKc_WNK 114 393 - -
Lapu9g01153 767 ProSitePatterns Serine/Threonine protein kinases active-site signature. 253 265 IPR008271 GO:0004672|GO:0006468
Lapu9g01153 767 MobiDBLite consensus disorder prediction 1 26 - -
Lapu9g01153 767 SMART DUF167_2 33 88 IPR003746 -
Lapu9g01153 767 Pfam Uncharacterised ACR, YggU family COG1872 37 83 IPR003746 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g01153 Lapu-Chr9 25070177 25076178 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu9g01153 229 579 MAP Kinase Kinase Kinase AT1G49160 64.103 8.23e-159 466
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Lapu9g01153 Pkinase 4.3e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g01153 K08867 - gmx:121175054 1015.76
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu9g01153 9 25070177 25076178 Lapu9g01153 9 25070177 25076178 ECH