Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g01144 ATGAGAAAACCCACAAAACCCATCCCCACATTCCTCCCAATCAAAATCCTCAGATCCACCCTCTTCCTCCTCCTCCTCTCCATGGCATCCCTCTTCTTCCTCTCCCTCCTCTTCTTCCTCAACGTCCACCCTCACTCCTCCGCCCTGCAGATCCACACAGCCTGCAATGCCACGCGCTTCCCTCCCCAATGCCGCGCCTCCCTCACCCGCCTCCCTCCCAACCCCACCCCTCTCCAAATCATCCAATCCGCCATCACAGCCTCCTCCTCCAATCTCATCACCGCGCGATCCAAGGTGCACTCCATCCTTCACGCCTCCGCTGACAATCGCACCCGCTCCACCAACGCCAAAAGCTGCCTCCAGGTCCTCCATTACTCCACCCACCGCACCGCCCTCGCCGCTGCTGCACTCCCCCGCGGCGCCACAAAGGACGCGCGCGCCTGGATGAGCGCCGCCCTCGGCTACCAGTATGGCTGCTGGAACGGCCTCAAGTACATCAACGACACGGCGCTGGTCGCCGAAACCATGTCGTTCCTTGACTCTCTCGTCATCCTCTCCAGCAACGCTCTCAGCATGATGGTCTCCTACGACCTCTTCGGAAACGACACCGCGTCGTGGAGGCCGCCAATGACGGAGCGCGACGGCTTCTGGGAACCTTCCGGGACGAGGGGACTCGGGACTCGACCCAAGATACCGGCGAAATTGACGGCGGACGTTGCGGTGTGTAAGAGTGAGGGGTGTTACAAGACTGTGCAGGAAGCGGTTAACGCGGCGCCGGACGACGCGGAAGGGAGGTTTGTGATATATATAAAGGAAGGGGTTTATGAGGAGAGCGTGAGGGTTCCGTTGAGGAAGAGGAATGTGGTGTTCTTGGGGGATGGCATGGGTAAGACTGTGATCACGGGATCTGCTAACGTGGGCCAGTCCGGCGTCACCACCTACAACTCTGCCACCGTAGGGGTTGCTGGGGATGGATTTATGGCAAAGGATCTCACGATTCAGAACACGGCTGGTGCTAATGCTCACCAAGCTGTGGCCTTCAGATCAGACAGTGATCTTTCTGTCGTTGAGAACTGTGAATTCATAGGAAACCAAGATACTCTCTATGCTCATTCCCTGCGCCAATTTTATAAATCTTGCCGCATACAAGGCAACGTGGACTTCATCTTTGGCAACTCGGCAGCAATCTTCCAAGACTGTGAAATCCTAGTCCAGCCTCGGCAAGGCAGACCAGAGAAGGGTGAGAGTAATGCTGTTACTGCACAAGGTAGGACAGACCCTGCTCAGTCAACAGGATTTGTTTTCCAGAACTGTATGGTTAATGGTACGGAGGAATACATGGCATTGTATTATAGCAAACCTAAAGTTCACAGAAACTATCTGGGGAGGCCATGGAAGGAGTATTCTAGAACAGTTTTCATCCACACATTCTTGGAAGCCCTTATCACACCGCAGGGATGGATGCCGTGGACTGGGGATTTTGCTTTGAAAACGCTTTATTATGGGGAATTTGAGAACACAGGACCTGGTTCTAATCTGACTCAGAGGGTGCCCTGGAGTAACCAGGTACCCGCGGAGCACGTGTTCTCGTATTCAGCGCAGAGTTTCATTCAAGGAGATGATTGGACTCATCATTTCAGTCATTAG 1647 0.5458 MRKPTKPIPTFLPIKILRSTLFLLLLSMASLFFLSLLFFLNVHPHSSALQIHTACNATRFPPQCRASLTRLPPNPTPLQIIQSAITASSSNLITARSKVHSILHASADNRTRSTNAKSCLQVLHYSTHRTALAAAALPRGATKDARAWMSAALGYQYGCWNGLKYINDTALVAETMSFLDSLVILSSNALSMMVSYDLFGNDTASWRPPMTERDGFWEPSGTRGLGTRPKIPAKLTADVAVCKSEGCYKTVQEAVNAAPDDAEGRFVIYIKEGVYEESVRVPLRKRNVVFLGDGMGKTVITGSANVGQSGVTTYNSATVGVAGDGFMAKDLTIQNTAGANAHQAVAFRSDSDLSVVENCEFIGNQDTLYAHSLRQFYKSCRIQGNVDFIFGNSAAIFQDCEILVQPRQGRPEKGESNAVTAQGRTDPAQSTGFVFQNCMVNGTEEYMALYYSKPKVHRNYLGRPWKEYSRTVFIHTFLEALITPQGWMPWTGDFALKTLYYGEFENTGPGSNLTQRVPWSNQVPAEHVFSYSAQSFIQGDDWTHHFSH* 549
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g01144 548 PANTHER PECTINESTERASE 31 542 - -
Lapu9g01144 548 Pfam Pectinesterase 239 540 IPR000070 GO:0030599|GO:0042545
Lapu9g01144 548 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 51 192 IPR035513 -
Lapu9g01144 548 CDD PMEI-like_3 53 193 - -
Lapu9g01144 548 FunFam Pectinesterase 232 548 - -
Lapu9g01144 548 SUPERFAMILY Pectin lyase-like 238 544 IPR011050 -
Lapu9g01144 548 NCBIfam pectinesterase inhibitor domain 29 191 IPR006501 GO:0004857
Lapu9g01144 548 Pfam Plant invertase/pectin methylesterase inhibitor 51 192 IPR006501 GO:0004857
Lapu9g01144 548 Gene3D Invertase/pectin methylesterase inhibitor family protein 47 195 IPR035513 -
Lapu9g01144 548 SMART PMEI_2 46 192 IPR006501 GO:0004857
Lapu9g01144 548 Gene3D - 232 547 IPR012334 -
Lapu9g01144 548 FunFam Probable pectinesterase/pectinesterase inhibitor 51 49 195 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g01144 Lapu-Chr9 24950304 24953517 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu9g01144 42 542 Carbohydrate Esterase AT5G09760 67.641 0.0 714
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g01144 - - gmx:100802102 897.501