Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g01129 ATGAATTTCCCTTGTCTTACTGGCATCTCCGGACGTGTGGTTGCTCCTCTTTATGCCGCTGTTCCCACTGCAACTATCAGGGGCAATAAGGCGGATAGTTTTGCAATTGAAGGGCGTAATCTGAGATTCTCATTCGCGACTAGGAAAACGCAGGATGTACCGGTTCTTAGGGATTGTTCGGTTCGCATTCCTTGCGGGCAGTTTTGGATGCTTCTTGGACCCAATGGTTGTGGAAAATCTACCCTCTTGAAGATTTTGGCTGGTCTCTTGACCCCAACTTCAGGAACAGTGAACGTGAATGGACCTAAAAGTTTCGTTTTCCAAAATCCAGATCACCAGGTGGTTCTGCCTACTGTAGATGCTGATGTTGCATTTGGTCTTGGTAAGATGGATTTGAGTCACGAAGAAGTCAGGTCTAGGGTGTCAAGAGCTTTGCATGCTGTAGGCCTGTCTGATTACATGAAGAGATCTGTCCAAACTCTGAGTGGTGGTCAAAAGCAGAGGGTTGCCATAGCTGGTGCTCTGGCAGAAGCTTGTAAAGTTCTGTTGTTGGATGAGCTCACAACATTCTTAGATGAAACTGACCAGGTCGGAGTTATCAAAGCTGTCAGGAACTCTGTGGATACCTCTGCAGAAGTTACGGCATTATGGGTCACCCATCGTTTGGAAGAACTAGAGTATGCAGATGGTGCCATCTACATGGAGGATGGGAAAGTTGTCATGCATGGAGATGCCTCTACCATTAGGAGTTTCATTGAAGCCAGACAATCTGCCTATATAAACCAGATTAATTCTTAA 798 0.4599 MNFPCLTGISGRVVAPLYAAVPTATIRGNKADSFAIEGRNLRFSFATRKTQDVPVLRDCSVRIPCGQFWMLLGPNGCGKSTLLKILAGLLTPTSGTVNVNGPKSFVFQNPDHQVVLPTVDADVAFGLGKMDLSHEEVRSRVSRALHAVGLSDYMKRSVQTLSGGQKQRVAIAGALAEACKVLLLDELTTFLDETDQVGVIKAVRNSVDTSAEVTALWVTHRLEELEYADGAIYMEDGKVVMHGDASTIRSFIEARQSAYINQINS* 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g01129 265 CDD ABC_cobalt_CbiO_domain1 37 238 IPR015856 GO:0005524|GO:0016020|GO:0055085
Lapu9g01129 265 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 33 253 IPR027417 -
Lapu9g01129 265 Gene3D - 31 264 IPR027417 -
Lapu9g01129 265 Pfam ABC transporter 56 188 IPR003439 GO:0005524
Lapu9g01129 265 ProSitePatterns ABC transporters family signature. 161 175 IPR017871 GO:0005524|GO:0016887
Lapu9g01129 265 PANTHER ABC TRANSPORTER I FAMILY MEMBER 10 36 250 - -
Lapu9g01129 265 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 41 261 IPR003439 GO:0005524
Lapu9g01129 265 SMART AAA_5 65 238 IPR003593 GO:0016887
Lapu9g01129 265 FunFam ABC transporter I family member 10 32 262 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g01129 Lapu-Chr9 24734532 24737666 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu9g01129 36 248 Calmodulin-binding Proteins AT2G36910 29.870 3.97e-22 94.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g01129 - - pvu:PHAVU_009G150700g 486.108
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu9g01129 9 24734532 24737666 Lapu9g01129 9 24734532 24737666 ECH