Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g01116 ATGCAGGAGGACAAGAAGATGAAGGTGAAGAAAGGCTTCTTGGCTGTCCAAGTGGGTTTAGAAGACGATGATTGTTCCTCTTCTCAGAGATTCGTGATCCCCATCTCATACCTCTACCACCCTCTCTTCAAGCGTCTTCTCGACAAAGCTCGCGAGGTCTACGGCTACCACACCGATGGCCCCCTCAAGCTCCCCTGCTCCGTCGACGATTTTCTCCATCTCCGTTGGCGTATCGAAAAGGAGTCAACTTCCCATCAACACCACCATAACCACACCAACCATCGTCTTCCCCACGCTCTGCACTTCCACTCTTGTTGA 318 0.5189 MQEDKKMKVKKGFLAVQVGLEDDDCSSSQRFVIPISYLYHPLFKRLLDKAREVYGYHTDGPLKLPCSVDDFLHLRWRIEKESTSHQHHHNHTNHRLPHALHFHSC* 106
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g01116 105 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 5 74 IPR003676 GO:0009733
Lapu9g01116 105 Pfam Auxin responsive protein 5 77 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g01116 Lapu-Chr9 24188433 24188750 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu9g01116 9 86 Calmodulin-binding Proteins AT3G43120 45.679 3.31e-14 62.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g01116 K14488 - gmx:100809305 195.667