Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g01084 ATGACCATGGAAAAAGGTCTCTTTTCAGACCTTAGAATAAGGTCAAGGAAAGCCACTTTATCAGATTGTTCCAACTTTTTAGGACGTGAGATTGACATTTGTGTTCTCTCAGCCTCTCAAAGTGGTGATACTAATTCAGATGGATTCAGTGCTAATCAGGTGTGGGTTGATGCTAAAATAAATTCTATACAGAGACAATCCCATAATCCAGGGTGCTTATGTCTGTATTATGTAAACTTCTATGTTAATCAAGGTTCACTTGGAAGAGAGATAAGAAGTCTTAGTAAGGAGGTTAAGATAATTGGAATCAATGAAATTGCCATCCTCCAAAAGTTTGAACGTAATACTTGTGAAGACCAACACTATCGCTGGGAATCATCCCAAGATTGCTCCAAATTATCAGATACAAAATTGATCCTAGGAAAGTTTTTATCTGATCTTTCATGGTTGGTTGTTACATCTGCATTAAAGAAGGTTTCATTTTGCGCAAGATCTTTGGAAAACAAGATTGTGTATCAAATGGATGCAGAATCCAAAAGAAGAAGGGGTTGTGTCATATCTCATTCTCCTGGATCGGGTAAAACTTTTCTTATCATTGCATTTCTCATTAGCTATTTAAAGCTATTTCCAGGGATGAAACCTCTTGTCCTTGCTCCAACAACCACTCTTCACACTTGGCACAAAGAATTCGTCAAATGGAATATTTCTATGCCAGTGTATCTGATTCATGGACGTGTTGGACCTCAGAAAGATGATATGCAAAATTCAATTGTTCTTCCTAGTTTTTCAAAAGCAAATGAAGGTGTCAAACATATTTTGAACTGCTTGGACAAGATAAAAAAGTGGCTAAAACATTAA 858 0.3636 MTMEKGLFSDLRIRSRKATLSDCSNFLGREIDICVLSASQSGDTNSDGFSANQVWVDAKINSIQRQSHNPGCLCLYYVNFYVNQGSLGREIRSLSKEVKIIGINEIAILQKFERNTCEDQHYRWESSQDCSKLSDTKLILGKFLSDLSWLVVTSALKKVSFCARSLENKIVYQMDAESKRRRGCVISHSPGSGKTFLIIAFLISYLKLFPGMKPLVLAPTTTLHTWHKEFVKWNISMPVYLIHGRVGPQKDDMQNSIVLPSFSKANEGVKHILNCLDKIKKWLKH* 286
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g01084 285 Pfam SNF2-related domain 175 264 IPR000330 GO:0005524|GO:0140658
Lapu9g01084 285 Gene3D - 159 275 IPR038718 -
Lapu9g01084 285 PANTHER SNF2 DOMAIN-CONTAINING PROTEIN CLASSY 2-RELATED 5 153 IPR044567 GO:0080188
Lapu9g01084 285 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 174 261 IPR027417 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Lapu9g01084 Lapu-Chr9 20652000 20653195 Tandem
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SNF2 Lapu9g01084 SNF2_N 1e-05 CL0023
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g01084 K10875 - gmx:100781856 258.84