Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g01067 CTCATACGTTTCAAGTCTCAGAGCAGAGCAGAACAGAGCATTCACCAACGACAACTACAACTGCAACCAAAAACCTGCAAATCACAAGATTTTTCAGTTAAGGGAACAACAAGCAAGAGAGAAGAAGAAAAGGGAATGAAGGGAGAATTAGAGTTGCCGCCTGGGTTCAGGTTTCACCCCACGGATGATGAATTGGTAAACCACTATCTGTGTAGGAAATGCGCTGGTCAACCAATTGCTGTTTCTATCATCAAAGAGGTCGATTTGTACAAGTTTGATCCATGGCAGCTTCCAGAAATGGGATTCTACGGCGAGAAAGAATGGTACTTCTTTTCTCCTCGGGACCGCAAATACCCCAACGGCTCACGGCCGAATCGCGCCGCCGGAAGTGGGTACTGGAAAGCCACCGGTGCTGATAAACCGATCGGAAAGCCGAAAGCGCTTGGGATAAAGAAAGCTTTGGTTTTTTACTCGGGAAAAGCCCCCAAAGGAGAGAAAACCAATTGGATCATGCACGAATATCGCCTCGCCAATGTTGACCGATCAGCCTCCAAGAAAAATAACAACCTCAGGCTTGACGATTGGGTGTTGTGTCGAATTTACAACAAGAAAGGGAAAATTGAGAAACACAACACGGGGGCAATCAAAATGGAGCCTGGGGTGGTTCATAATTTCGATCACGAGCACGAGAACGAGACGAAGCCGGAGATTCAGAAGCTTGGGAATGAGCAATTGTTTATGGAGAGTTCAGATTCAATGCATAGGTTGCATACTGAGTCGAGCTATTCAGAGCAGGTGGTTTCGCCGGACGTGACGTGGGAGAGGGAGGTGCAGAGCCACCCCAAATGGAATGACATAGGGCTACAGCTTGAAAATGCGTTTGATTTTAAATACAATTACTTTGACGATAATAACCTTTCGGTAGATAACCCTTTTGGGAGTGTGGAATACCAAATGGGCCACATCTCCCCCCTGCAGGACGTGCTCATGGAAGCCCTATTGATGTGA 1008 0.4692 LIRFKSQSRAEQSIHQRQLQLQPKTCKSQDFSVKGTTSKREEEKGMKGELELPPGFRFHPTDDELVNHYLCRKCAGQPIAVSIIKEVDLYKFDPWQLPEMGFYGEKEWYFFSPRDRKYPNGSRPNRAAGSGYWKATGADKPIGKPKALGIKKALVFYSGKAPKGEKTNWIMHEYRLANVDRSASKKNNNLRLDDWVLCRIYNKKGKIEKHNTGAIKMEPGVVHNFDHEHENETKPEIQKLGNEQLFMESSDSMHRLHTESSYSEQVVSPDVTWEREVQSHPKWNDIGLQLENAFDFKYNYFDDNNLSVDNPFGSVEYQMGHISPLQDVLMEALLM* 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g01067 335 ProSiteProfiles NAC domain profile. 52 203 IPR003441 GO:0003677|GO:0006355
Lapu9g01067 335 MobiDBLite consensus disorder prediction 30 53 - -
Lapu9g01067 335 FunFam NAC transcription factor 61 207 - -
Lapu9g01067 335 SUPERFAMILY NAC domain 47 203 IPR036093 GO:0003677|GO:0006355
Lapu9g01067 335 Gene3D NAC domain 61 208 IPR036093 GO:0003677|GO:0006355
Lapu9g01067 335 PANTHER NAC TRANSCRIPTION FACTOR 56 52 248 - -
Lapu9g01067 335 MobiDBLite consensus disorder prediction 34 53 - -
Lapu9g01067 335 Pfam No apical meristem (NAM) protein 53 176 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g01067 Lapu-Chr9 19615790 19617629 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu9g01067 46 330 NAC Transcription Factor Family AT1G01720 60.943 2.66e-120 346
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lapu9g01067 NAM 4.8e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g01067 - - gmx:100814504 506.138