Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g01066 ATGAAGGGAGAATTAGAGTTGCCTCCTGGGTTCAGGTTTCACCCCACGGATGATGAATTGGTAAACCACTATCTGTGTAGGAAATGCGCTGGTCAACCAATTGCTGTTCCTATCATCAAAGAGGTCGATTTGTACAAGTTTGATCCATGGCAGCTTCCAGAAATGGGATTCTACGGCGAGAAAGAATGGTACTTCTTTTCTCCTCGGGACCGCAAATACCCCAACGGCTCACGACCGAATCGCGCCGCCGGAAGTGGGTACTGGAAAGCCACCGGTGCTGATAAACCGATCGGAAAGCCGAAAGCGCTTGGGATAAAGAAAGCTCTGGTTTTTTACTCGGGAAAAGCCCCCAAAGGAGAGAAAACCAATTGGATCATGCACGAATATCGCCTCGCCAATGTTGACCGATCAGCCTCCAAGAAAAATAACAACCTCAGGCTTGACGATTGGGTGTTGTGTCGAATTTACAACAAGAAAGGGAAAATTGAGAAACACAACACGGGGGCAATGAAAATGGAGGCTGAGGTGGTTCATAATTTCGATCACGAGCACGAGAACGAGACGAAGCCGGAGATTCAGAAGCTTGGGACTGAGCAATTGTTTATGGAGAGTTCAGATTCCATGCATAGGTTGCATACTGAGTCGAGCTATTCAGAGCAGGTGGTTTCGCCGGACGTGACGTGGGAGAGGGAGGTGCAGAGCCACCCCAAATGGAATGACATAGGGCTACAGCTTGAAAACGCGTTTGATTTTAAATACAATTACTTTGACGATAATAACCTTTCGGTAGATAACCCTTTTGGGAGTGTGGAATACCAAATGGGCCACATCTCCCCCCTGCAGGACGTGCTCATGGAAGCCCTATTGATGTGA 873 0.48 MKGELELPPGFRFHPTDDELVNHYLCRKCAGQPIAVPIIKEVDLYKFDPWQLPEMGFYGEKEWYFFSPRDRKYPNGSRPNRAAGSGYWKATGADKPIGKPKALGIKKALVFYSGKAPKGEKTNWIMHEYRLANVDRSASKKNNNLRLDDWVLCRIYNKKGKIEKHNTGAMKMEAEVVHNFDHEHENETKPEIQKLGTEQLFMESSDSMHRLHTESSYSEQVVSPDVTWEREVQSHPKWNDIGLQLENAFDFKYNYFDDNNLSVDNPFGSVEYQMGHISPLQDVLMEALLM* 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g01066 290 ProSiteProfiles NAC domain profile. 7 158 IPR003441 GO:0003677|GO:0006355
Lapu9g01066 290 FunFam NAC transcription factor 16 162 - -
Lapu9g01066 290 Gene3D NAC domain 16 163 IPR036093 GO:0003677|GO:0006355
Lapu9g01066 290 PANTHER NAC TRANSCRIPTION FACTOR 56 7 203 - -
Lapu9g01066 290 Pfam No apical meristem (NAM) protein 8 131 IPR003441 GO:0003677|GO:0006355
Lapu9g01066 290 SUPERFAMILY NAC domain 3 158 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g01066 Lapu-Chr9 19581713 19583267 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu9g01066 1 285 NAC Transcription Factor Family AT1G01720 61.246 2.67e-121 347
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lapu9g01066 NAM 2.8e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g01066 - - gmx:100814504 510.375