Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g01060 GTTATGCAGGTTCGATATGCTCCTCACTTGCCTATTGTTTTACGAGGTCTTACGTGCACTTTTACTGCTGGAGCAAAAACTGGTATTGTGGGAAGAACAGGAAGTGGAAAAACAACTTTAGTGCAAACACTTTTCCGACTAATTGAACCTGCTGCTGGACAAATATTGATAGATAGCATTAACATCACTTTGATTGGAATTCACGATTTGCGGTCCAGACTAAGCATTATTCCTCAAGAGCCGACAATGTTTGAAGGGACTGTAAGAACCAATCTGGATCCGCTGGAAGAGTACACAGATGAACAGATTTGGCAGGCTTTAGAGATGTGCCAACTTGGAGATGAAGTAAGGAAAAAAGAAGGGAAGCTTGACTCCGTAGTTACTGAAAATGGAGAAAATTGGAGTATGGGTCAAAGGCAATTGGTGTGCCTTGGCCGTGTTCTGCTCAAGAAAAGCAAGATCTTGGTGCTTGATGAGGCTACTGCATCAGTTGATACAGCCACAGATAATATTATTCAGCAAACACTTAAGCATCATTTTGCAGAATGCACAGTCCTTACCATTGCTCATAGGATAACTTCAATCATCGATAGTGACATGGTTCTGTTTTTAAATCAAGGGTTGATTGAGGAATATGACTCACCAAAGAAACTGCTTAAGAACAAATCTTCATCTCTAGCTCTACTGGTTGCAGAATACACAAGGAGATCAGACTCTAGCTCTCCCTCT 729 0.4129 VMQVRYAPHLPIVLRGLTCTFTAGAKTGIVGRTGSGKTTLVQTLFRLIEPAAGQILIDSINITLIGIHDLRSRLSIIPQEPTMFEGTVRTNLDPLEEYTDEQIWQALEMCQLGDEVRKKEGKLDSVVTENGENWSMGQRQLVCLGRVLLKKSKILVLDEATASVDTATDNIIQQTLKHHFAECTVLTIAHRITSIIDSDMVLFLNQGLIEEYDSPKKLLKNKSSSLALLVAEYTRRSDSSSPS 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g01060 243 SMART AAA_5 23 208 IPR003593 GO:0016887
Lapu9g01060 243 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 2 230 - -
Lapu9g01060 243 Pfam ABC transporter 14 162 IPR003439 GO:0005524
Lapu9g01060 243 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 4 223 IPR027417 -
Lapu9g01060 243 CDD ABCC_MRP_domain2 3 215 - -
Lapu9g01060 243 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 4 231 IPR003439 GO:0005524
Lapu9g01060 243 Gene3D - 2 232 IPR027417 -
Lapu9g01060 243 FunFam ABC transporter C family member 3 1 232 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g01060 Lapu-Chr9 19308404 19309559 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu9g01060 13 221 Calmodulin-binding Proteins AT2G36910 29.048 4.32e-30 116
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g01060 - K05666 gmx:106794105 422.55