Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g01051 ATGAAGTTAATCGGCGACGGAGCCGATGGCCGGAAGGTCCTTGTCGGAGTAAAATTAGATCCTCGCAGCCGCGAATTGCTGACGTGGGCTCTCGTCAAGGTGGCTGAGCCCGGCGACCTCGTCATTGCGCTTCACGTCCTCGACTCAATCACTGAGGGAACGGCATCGCTGTTATCTCTCGTGAAGACTTTCGACTCCGTTCTCGCTGTTTATGAAGGCTTCTGCAACCTGAAACAGGTTGGTCTGAGACTTAAAGTGTGTCGCGGTAGCTCGGTTCGGAAGGTTCTGGTGCAAGAGGCCAAGGCGTTTGGCGTTTCCACAGTGATTTTGGGAACTTCTAAGTCTCATCACACTATTCGTTCTTCCGCGTGGGTTGCGAAGTACTGTGCGAAGAAATTGCCGAAGTGTATCTCTGTCTTTTCTGTTGATAATGGCAAAATTGCTTTCCGGAGAGAAGCTAATGGAAATTGTAGTGATCGAGAAAAATCATGCGAAGGGTCAAGTTTGTCGCCAAAGTCGTTGGTGGTTTATACAAACAAGAATATGAAGAGTTGTGGAAGTTGTGCGTTGCAAGAGATTTCTGAAACTGAGTTTGAGCGAGGGTTGGGTGATGAGGTTGAGAAGGGTAATTCGCTTGCTTTGGTTCCGTTTAAGACACTTGATGATGGTCCTTGTTTTTCAGTTTTGGTGGATAATCCGAAGCATAAACCTGGCTGGTCACTGCTTCGCAATGTGTTTCATCACAAGAAGCATTCCCAAAAATCTTCCACGAAAAGTACATATATTTTTCAGCGGGCATTGCGGCAGCCGAATTTTCATTCTTCTGCTGTAGTCCATCCAGATCATAAACAAATTAGTATTGAGCAGATTGATGATTCCCCTCTCGATGGGGTGAGTGGTGCCATTGTGCCATTTGGATCTGCTACTAGTGTTACTCCTCCCTCGATTAGCTATGAGTTGGGTAACCTTCCTGAAGAATTGTTGGTATTACAAGAAAAGCACTCATCTTCGTGCACATTACATAGTTTGCAGGAGCTAGTATCTGCAACCTCCAACTTCTCACCAGAGAATTTGGTTGGCAAAGGTGGTTGTAGTTATGTTTACAGAGGATGTCTTCCAGATGGCAAGGAATTAGCCGTAAAAATTTTGAAGCCATCTGAAAACGTGATAAAGGAGTTTGTTCAGGAAATTGAGATCATTACAACTTTGCGCCACAAGAACATAATATCTATATCTGGCTTTTGTTTAGAGGGCAACCATTTGCTACTAGTTTATGATTTTTTGGCTCGGGGAAGCCTAGAAGAAAATCTTCATGGCAACAAAGCGGACTGTAGTGCATTTGGTTGGCAAGAAAGGTACAAGGTGGCTGTGGGTGTAGCTGAGGCACTGGATTATCTCCATAATGGCTGTGCTCAGGCTGTTATCCATAGGGATGTGAAATCTTCTAATATCCTTCTTTCAGATGATTTTGAGCCTAAGCTTTCAGATTTTGGACTGGCTAGTTGGGGTTCATCTTCTTCCCATGTTACTTGTACGGATGTAGCTGGAACTTTTGGATACCTCGCACCTGAGTACTTTATGCACGGTAGAGTGACTGATAAAATTGATGTATATGCTTTTGGTGTTGTTCTCCTTGAGCTTCTCTCAAATAGGAAGCCAATTAACAATGAATGTCCAAAGGGCCAGGAGAGCCTTGTTATGTGGGCAACACCAATATTGAGAGGTGAGAAGTTTTCCCAATTGCTTGATCCAAACCTAGGCAGTGAATACGATGATTGCCAGATAAAGAGAATGGTTTTGGCCGCTAGTCTCTGCATTAGACGGGTACCTAGACTGCGGCCACAAATAAGCCTTATATTGAAACTTCTGTGTGGTGATGAAGAGGTGACAAGATGGGCAGAACAAGAAGTTAATGCACCACAGGAACTTGATGGTTTTGACGAGGAACCAGTTCCAACTAACATACAATCCCACCTGAACCTTGCTTTGCTGGACTTGGAGGATGATACGGTTTCTATCAGTAGCACTGAGCAGAGTGTCTCTTTGGAGGACTATTTGCAGGGAAGATGGAGTCGCTCTTCAAGTTTTGACTGA 2094 0.446 MKLIGDGADGRKVLVGVKLDPRSRELLTWALVKVAEPGDLVIALHVLDSITEGTASLLSLVKTFDSVLAVYEGFCNLKQVGLRLKVCRGSSVRKVLVQEAKAFGVSTVILGTSKSHHTIRSSAWVAKYCAKKLPKCISVFSVDNGKIAFRREANGNCSDREKSCEGSSLSPKSLVVYTNKNMKSCGSCALQEISETEFERGLGDEVEKGNSLALVPFKTLDDGPCFSVLVDNPKHKPGWSLLRNVFHHKKHSQKSSTKSTYIFQRALRQPNFHSSAVVHPDHKQISIEQIDDSPLDGVSGAIVPFGSATSVTPPSISYELGNLPEELLVLQEKHSSSCTLHSLQELVSATSNFSPENLVGKGGCSYVYRGCLPDGKELAVKILKPSENVIKEFVQEIEIITTLRHKNIISISGFCLEGNHLLLVYDFLARGSLEENLHGNKADCSAFGWQERYKVAVGVAEALDYLHNGCAQAVIHRDVKSSNILLSDDFEPKLSDFGLASWGSSSSHVTCTDVAGTFGYLAPEYFMHGRVTDKIDVYAFGVVLLELLSNRKPINNECPKGQESLVMWATPILRGEKFSQLLDPNLGSEYDDCQIKRMVLAASLCIRRVPRLRPQISLILKLLCGDEEVTRWAEQEVNAPQELDGFDEEPVPTNIQSHLNLALLDLEDDTVSISSTEQSVSLEDYLQGRWSRSSSFD* 698
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g01051 697 SUPERFAMILY Protein kinase-like (PK-like) 334 623 IPR011009 -
Lapu9g01051 697 Pfam Universal stress protein family 11 134 IPR006016 -
Lapu9g01051 697 ProSiteProfiles Protein kinase domain profile. 353 629 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu9g01051 697 FunFam probable receptor-like serine/threonine-protein kinase At5g57670 10 143 - -
Lapu9g01051 697 Gene3D HUPs 10 142 IPR014729 -
Lapu9g01051 697 PANTHER OS08G0249100 PROTEIN 120 641 IPR046958 -
Lapu9g01051 697 CDD USP_Like 12 137 - -
Lapu9g01051 697 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 11 115 - -
Lapu9g01051 697 Gene3D Phosphorylase Kinase; domain 1 323 427 - -
Lapu9g01051 697 Pfam Protein kinase domain 356 561 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu9g01051 697 FunFam probable receptor-like serine/threonine-protein kinase At5g57670 322 427 - -
Lapu9g01051 697 SMART serkin_6 353 623 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu9g01051 697 FunFam Putative receptor-like serine/threonine-protein kinase 428 639 - -
Lapu9g01051 697 Gene3D Transferase(Phosphotransferase) domain 1 428 642 - -
Lapu9g01051 697 ProSitePatterns Serine/Threonine protein kinases active-site signature. 474 486 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g01051 Lapu-Chr9 18469037 18472875 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu9g01051 336 619 Trihelix Transcription Factor Family AT1G68690 45.517 6.01e-77 258
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Lapu9g01051 Pkinase 1.4e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g01051 - - gmx:100815722 1251.88