Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g01032 ATGGAGAACAGTCAGCAAGGGGGCCAAGGGCAATCGGGAGCGTACCCCGGCGGGGCGGCCGGAAGTGCAGGTGCGGGAGCGCCTCACTTCCAGCACCTCCTCCACCAGCAGCAGCAGCAGCTGCAGATGTTCTGGTCCTACCAGCGCCAAGAGATCGAGCACGTCAACGACTTCAAGAACCACCAGCTCCCCCTCGCCCGCATCAAGAAGATCATGAAGGCCGACGAGGACGTTCGCATGATCTCCGCGGAAGCCCCTATCCTATTCGCCAAGGCCTGCGAGCTCTTCATCCTCGAGCTCACCATCCGCTCCTGGCTCCACGCCGAGGAGAACAAGCGCCGCACCCTCCAGAAGAACGACATCGCCGCCGCCATCACCCGCACCGACATTTTCGACTTCCTTGTTGACATCGTCCCTCGCGACGAGATCAAGGACGACGCTGCGCTCGTCGGGGCCACCGCTAGTGGTGTGCCCTACTACTACCCTCCCATTGGCCAGCCTGCTGGCATGATGATTGGCCGTCCCGCCGTTGATCCCGCCACCGGAGTCTACGTCCAGCCCCCGTCCCAGGCCTGGCAGTCTGTCTGGCAGTCCGCCGACGATTCGTCCTATGGTGGCGCCGCCGGAGCCGGTGCCCAGGGGAGCATTGATGGCCAGAGCTGA 663 0.6395 MENSQQGGQGQSGAYPGGAAGSAGAGAPHFQHLLHQQQQQLQMFWSYQRQEIEHVNDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWLHAEENKRRTLQKNDIAAAITRTDIFDFLVDIVPRDEIKDDAALVGATASGVPYYYPPIGQPAGMMIGRPAVDPATGVYVQPPSQAWQSVWQSADDSSYGGAAGAGAQGSIDGQS* 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g01032 220 MobiDBLite consensus disorder prediction 200 220 - -
Lapu9g01032 220 MobiDBLite consensus disorder prediction 1 26 - -
Lapu9g01032 220 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 36 155 - -
Lapu9g01032 220 Pfam Core histone H2A/H2B/H3/H4 51 125 IPR007125 GO:0003677
Lapu9g01032 220 SUPERFAMILY Histone-fold 36 134 IPR009072 GO:0046982
Lapu9g01032 220 Gene3D Histone, subunit A 28 140 IPR009072 GO:0046982
Lapu9g01032 220 FunFam Nuclear transcription factor Y subunit gamma 31 140 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g01032 Lapu-Chr9 17776697 17782727 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu9g01032 22 199 CCAAT-HAP5 Transcription Factor Family AT3G48590 84.492 1.84e-103 297
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YC Lapu9g01032 CBFD_NFYB_HMF 2.2e-17 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g01032 - - gmx:100818447 336.265