Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g01031 ATGGAATGTAAAAAGGATGGTGCCTTAAGGGCAAAAGAACTTGCAGAGAAGATGCTTTTACAGAAGAACTTTGGTGGGGCAAGAATGCTTGCAATGAAGGCTCTAGAATTATATCCCAATCTTGATGGCCTTCATCGATTTCTAGCAACTATTGAGGTGTATATCTCAGCTGATAAAAAAGTTAATGGAGAAGTTGATTGGTACAAGATCCTTGGTGTGCAACCCTTGGCTGATGAAGAAACAATTCGAAGGCGATATAGGAAACTTGCTCTTACTCTGCACCCTGATAAAAATAAATCCGTAGGTGCAGATGGGGCATTTAACCTTATCTCACAGGCTTGGAGTTTATTATCTGATAAAGCCAAGAGAATCAACTATGACCAAAAGTGCAACTTATGGCGTACATATCATGGAAATCCTGGTGGGAAACCATCTGTACCAGCTAGTCAGAATGGTTTATATAGTAATTTATTCACTCCTGTGTTGTTGAAACCCACATTTTGGACCATTTGCAATTTCTGTAAGACAAAGTTTGAGTACCATAATGTTTATATTAACTCTGATCTTGTCTGTACATGCTGTCATAAGCCATTTGTGGCTTCTGAGACATCACCTCCACCTGGATACAGAAATGGTTCATCCACTTCAAGAATTTCTCAGATGAAGCAACATAACATCAACTCAAGCAGAATGGAAAGAAGTAATGGAAATCATTTTCCCGGAAGGACACCAATGTCTGCTGCCAATTCAGCACATGAATCAGGTCCTTTCACTATGCCCGGTGGCACTTCCTGCATACCAACATCAGCTTCTAGTGCTGCAGAAGCTCTTGGTGCTTTTAGGATGTTTTCTGAAAATTTGAAGAGAAGGCATGAAGATTCATCTGTGTCGAGGGAGGAAGCCCATTTTGGAAAAGTTCATGCTGTTGAGAGAACTGATGCTGTTTCAGTTTTTCAGTCCTCTCATTATATTATGAAAGGTGACAAGCCAAGGAAGAGAAGGTCCACTGATGAACATAGAGTAGGTAGCGATAGAAGAGATATGGAAAACAAAACAGTATCTCAAAATGAGGGAACAAACTTGGCTAATGAATTTGGTTCAGGAAGGGTTAATGCTGCTGGAAATTACAAACGCAACGGTGTTAGGGATGGATCACAGCTTCAAATGAAGCACATATTGGTGGAAAAGGCTCGGAAGGAGATTCTTAAGAAGCTTGATGAATGGAAAGCTTCTTCTGCATCAAAGAGTCTAGACAAGTCAAAGAATACTGACACAGAAATCAGTGAGAAGGGGAAAGGTTATGAAATTAATGGTTTAAAACCTGGTGCACAGGAATTTGTTGATTCTGGGCCTGCTGGCAAGAAGTGTTTTTCTGTTCATCCAGATCCTGAGCTTCCTGGTTCTCTCTCTATGAATGTTCCAGACCCAGATTTCCATGATTTTGATGGAGATCGTATTGAAAATGCTTTTGGTGAGAACCAGGTGTGGGCTGCATATGACAATGATGATGGCATGCCCCGCTTCTATTGTTTAATCCATGACGTAATCTCGAAGAATCCTTTCAATATGAGGATAAGCTGGTTGAATACCAAAAGCAATGATGAATTGGCCCCAATAAAGTGGATCAGTTCTGGTTTTCTTAAGACGAGTGGAGATTTCAGAATAGGAAAGCGTGTTTCCTATAGCACTCTTAACTCCTTCTCACACAGGGTGAAGTGGACAAAAGGTTCGAGAGGAGTTGTCCATATATATCCGAAGAAAGGTGATGTATGGGCACTGTATCGGAACTGGTCCCTTGACTGGAATGAATTCACTAAAGATGAAATCATACAGAAATATGACATGGTGGAGGTGCTTGAGGACTACAATGAAGAGCAAGGAGTGAATGTTGCCCCACTAGTTAAGCTTGCAGGTTTCAAGACGGTATTTCAGCAGAATGTTGATCCAAGAAAAATCAGGAATATTTCAAAGGCGCAGATGTTTCGTTTCTCACACCAGGTACCTTCGTACATGCTTACTGGTGAAGAGGGTCCCAGTGCTCCTAAAGGTTGCTTGGAGCTTGATCCTGCTGCTACGCCGATGGAACTTCTTCAGGTGTTAGCTGAAGATCTGGAGCAAGAAATAGTAATGACAACTGTAAAATCTGTGGAAGATGAATTGAAGCTCACAGAGAATTCCAGGGAGGAGGGATTGCTTAAGGGGTGTCAGACAACTAAGGAAGAAGGTTCTGATGCAGGATTGGGAGAGAAGAAAAGCAAGCCGGAGATTTTGTTTGTATATAAGCGGAGACGTCTGAGGGAAAAGAGTGCTGTGAAGTGTTAA 2322 0.4156 MECKKDGALRAKELAEKMLLQKNFGGARMLAMKALELYPNLDGLHRFLATIEVYISADKKVNGEVDWYKILGVQPLADEETIRRRYRKLALTLHPDKNKSVGADGAFNLISQAWSLLSDKAKRINYDQKCNLWRTYHGNPGGKPSVPASQNGLYSNLFTPVLLKPTFWTICNFCKTKFEYHNVYINSDLVCTCCHKPFVASETSPPPGYRNGSSTSRISQMKQHNINSSRMERSNGNHFPGRTPMSAANSAHESGPFTMPGGTSCIPTSASSAAEALGAFRMFSENLKRRHEDSSVSREEAHFGKVHAVERTDAVSVFQSSHYIMKGDKPRKRRSTDEHRVGSDRRDMENKTVSQNEGTNLANEFGSGRVNAAGNYKRNGVRDGSQLQMKHILVEKARKEILKKLDEWKASSASKSLDKSKNTDTEISEKGKGYEINGLKPGAQEFVDSGPAGKKCFSVHPDPELPGSLSMNVPDPDFHDFDGDRIENAFGENQVWAAYDNDDGMPRFYCLIHDVISKNPFNMRISWLNTKSNDELAPIKWISSGFLKTSGDFRIGKRVSYSTLNSFSHRVKWTKGSRGVVHIYPKKGDVWALYRNWSLDWNEFTKDEIIQKYDMVEVLEDYNEEQGVNVAPLVKLAGFKTVFQQNVDPRKIRNISKAQMFRFSHQVPSYMLTGEEGPSAPKGCLELDPAATPMELLQVLAEDLEQEIVMTTVKSVEDELKLTENSREEGLLKGCQTTKEEGSDAGLGEKKSKPEILFVYKRRRLREKSAVKC* 774
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g01031 773 ProSiteProfiles dnaJ domain profile. 66 130 IPR001623 -
Lapu9g01031 773 MobiDBLite consensus disorder prediction 330 352 - -
Lapu9g01031 773 SUPERFAMILY Chaperone J-domain 63 143 IPR036869 -
Lapu9g01031 773 PRINTS DnaJ domain signature 68 86 IPR001623 -
Lapu9g01031 773 PRINTS DnaJ domain signature 102 122 IPR001623 -
Lapu9g01031 773 PRINTS DnaJ domain signature 86 101 IPR001623 -
Lapu9g01031 773 Pfam DnaJ domain 66 127 IPR001623 -
Lapu9g01031 773 ProSitePatterns Nt-dnaJ domain signature. 107 126 IPR018253 -
Lapu9g01031 773 MobiDBLite consensus disorder prediction 325 366 - -
Lapu9g01031 773 PANTHER BNAC03G44070D PROTEIN 1 693 - -
Lapu9g01031 773 Gene3D DnaJ domain 64 165 IPR036869 -
Lapu9g01031 773 CDD DnaJ 66 119 IPR001623 -
Lapu9g01031 773 Pfam Domain of unknown function (DUF3444) 470 676 IPR024593 -
Lapu9g01031 773 SMART dnaj_3 65 122 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g01031 Lapu-Chr9 17772617 17774938 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu9g01031 8 207 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 33.333 3.06e-25 106
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g01031 - - gmx:100797672 1256.89
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu9g01031 9 17772617 17774938 Lapu9g01031 9 17772617 17774938 ECH