Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g00997 ATGGCCGCTCTCACCTCTCTCTCCCTCTCTCTCCGCCCCCTCTCTCTCCACCGTGAGCCAACCACAACAATCACCGCTTCACTTTCTTCACTCCCAGGAAGCACCCATGGGTCTACCACCAAAGCGCCTCGCAGAAGAGCCAGGCGAATCGAAGGCCCTAGGAAAAGCATGGAGGACTCGGTTCAACGCAAGATGGAGCAGTTTTACGAAGGCTCCGATGGGCCTCCGCTTCGCGTTCTTCCCATTGGCGGTTTGGGGGAGATTGGGATGAACTGCATGCTGGTCGGCAACCACGACCGCTATATCCTCATCGACGCTGGTGTCATGTTTCCAGACTATGACGAACTTGGAGTTCAGAAGATTATACCTGACACCACGTTTATAAGAAAGTGGAGCCACAAAATTGAGGCGCTTGTCATAACACACGGTCATGAAGATCATATTGGTGCGTTGCCTTGGGTCATCCCGGCATTGGATTCCAATACACCAATTTTTTCATCTTCCTTTACAAAGGAGCTTATAAACAAACGTTTGAAGGAACATGGTATTTTTGTTCCATCTAGACTAAAAGTATTTAGAATGAGGAAGAAGTTTGTGGCTGGGCCATTTGAGATAGAACCTATCAGGGTGACCCATTCTATTCCTGATTGTTGTGGACTTGTTCTTCGCTGTTCTGATGGTACTATTCTTCACACTGGGGACTGGAAGATTGATGAGACACCATTAGATGGGAATGTTTTTGATCGCGAAGCTTTAGAGGAACTCTCTAAAGAGGGAGTAACATTGATGATGAGTGATTCAACAAATGTACTCTCACCTGGTAGGACAATCAGTGAATCAGTTGTGGCAGATGCATTGTTGAGACATATTTCAGCTTCTAATGGAAGGGTCATTACCACCCAATTTGCATCAAATTTACATCGGCTCGGAAGTGTGAAAGCTGCTGCTGATTTAACTGGCAGAAAGTTGGTATTTGTTGGCATGTCCTTAAGGACATATCTAGATGCAGCTTGGAAGGATGGAAAGGCTCCAATTGATCCATCCACTCTGGTGAAAGCAGAGGATATTGATGCTTATGCTCCAAAGGATCTGCTAATTGTAACAACAGGTTCTCAAGCAGAACCACGTGCTGCATTGAACCTTGCATCTTATGGAAGTAGTCATGCTTTCAAACTAACCAAGGAAGATCTTGTTTTGTATTCAGCTAAGGTTATCCCTGGTAATGAGTCTCGTGTGATGAAAATGCTAAACCGTATATCGGAGATTGGATCAACTATAGTTATGGGAAAAAATGAAGGTCTGCACACATCTGGTCATGCATATCGTGGAGAATTGGAAGAAGTGCTTAGAATAGTGAAGCCACAACATTTTCTTCCCATCCATGGAGAACTTTTGTTCCTGAAGGAACATGAATTACTGGGAAAATCAACTGGCATTCGGCATACTGCTGTCATTAAGAATGGAGAGATGCTTGGTGTTACACATTTGAGAAATAGAAAAGTCCTTTCTAATGGTTTCATTTCCCTTGGAAAAGAGAATTTACAGTTGAAATATAGTGATGGAGATAGAGCATTTGGTACATCAAGTGAACTCTTCATTGATGAAAGATTGAGAATCGCATTAGATGGCATCATTGTCACTAGCATGGAAATATTCCGCCCTAAGAGTGTAGGTAGTTTGGCTGCAAACACCTTAAAAGGGAAGATAAGGATTACTACAAGATGCTTATGGCTCGACAAAGGAAAGCTGATGGATGCACTCTACAAATCTGCTCATGCCGCTCTTTCAAGCTGCCCTGTAAATAGTCCTCTGGCTCACATAGAAAGAACTGTGTCTGAGGTATTGAGAAAGATGGTGAGAAAGTATAGTGGTAAACGGCCTGAAGTTATTGCCATTGCCATAGAAAATTCTGCATCCGCTATTGCTGATGAGATAAACACAAAATTGTCTGGCAAAATCCATGAGGGTCTTGGAATATCAACATCAAAAAGAGCAATGGATAGACATGAGAAAGGAAATCAGCTCACCTCAGTGCAAGTTACAGATGACAGTATTGATAGTGCAAGTGGAGCTGAGGGTTATTTATCTGAGGAAGATAACACTGCAAGCGGGGCTGAGGGTGATTTATCCAAGTCAGAGGATTCAGATGAATTTTGGAAACCATTCATTACATCATTACCCGTTGAGAAGCCATTTGGTGCTGACGATGCCTATGATTCACAAAAGGAGCATGAGTCAAATCTGAACAAAGATGATTCTAAGAACATTGATGAAGCCAAGTCTGAAGAAACCTCTATTTCTGAACCCAAGTCTTCAAAATCAGTAAAGAGAAATAAATGGAAAACTGATGAAGTTAAGAAACTGATTGGTCTGCGTGAGGAACTACGTGACAGATTTCAAGTTGTTAAGGGAAGGATGGCCCTCTGGGAAGAGATATCTCAAAAATTGTTGGCTGATGGGATCAGCAGAAGTCCTGGACAGTGCAAATCTTTGTGGACATCTTTGGTACTTAAATATGAGGGCATCAAGAATGAGAAGGATAGGAAGAAAAGTTGGCCATATATTGAGGACATGGAAAGGATAATGTCTGATAAAGAAGCTCCTGCAACAAAATGA 2616 0.4266 MAALTSLSLSLRPLSLHREPTTTITASLSSLPGSTHGSTTKAPRRRARRIEGPRKSMEDSVQRKMEQFYEGSDGPPLRVLPIGGLGEIGMNCMLVGNHDRYILIDAGVMFPDYDELGVQKIIPDTTFIRKWSHKIEALVITHGHEDHIGALPWVIPALDSNTPIFSSSFTKELINKRLKEHGIFVPSRLKVFRMRKKFVAGPFEIEPIRVTHSIPDCCGLVLRCSDGTILHTGDWKIDETPLDGNVFDREALEELSKEGVTLMMSDSTNVLSPGRTISESVVADALLRHISASNGRVITTQFASNLHRLGSVKAAADLTGRKLVFVGMSLRTYLDAAWKDGKAPIDPSTLVKAEDIDAYAPKDLLIVTTGSQAEPRAALNLASYGSSHAFKLTKEDLVLYSAKVIPGNESRVMKMLNRISEIGSTIVMGKNEGLHTSGHAYRGELEEVLRIVKPQHFLPIHGELLFLKEHELLGKSTGIRHTAVIKNGEMLGVTHLRNRKVLSNGFISLGKENLQLKYSDGDRAFGTSSELFIDERLRIALDGIIVTSMEIFRPKSVGSLAANTLKGKIRITTRCLWLDKGKLMDALYKSAHAALSSCPVNSPLAHIERTVSEVLRKMVRKYSGKRPEVIAIAIENSASAIADEINTKLSGKIHEGLGISTSKRAMDRHEKGNQLTSVQVTDDSIDSASGAEGYLSEEDNTASGAEGDLSKSEDSDEFWKPFITSLPVEKPFGADDAYDSQKEHESNLNKDDSKNIDEAKSEETSISEPKSSKSVKRNKWKTDEVKKLIGLREELRDRFQVVKGRMALWEEISQKLLADGISRSPGQCKSLWTSLVLKYEGIKNEKDRKKSWPYIEDMERIMSDKEAPATK* 872
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g00997 871 Gene3D - 81 493 IPR036866 -
Lapu9g00997 871 MobiDBLite consensus disorder prediction 735 777 - -
Lapu9g00997 871 MobiDBLite consensus disorder prediction 661 715 - -
Lapu9g00997 871 MobiDBLite consensus disorder prediction 25 61 - -
Lapu9g00997 871 Pfam Myb/SANT-like DNA-binding domain 777 861 IPR044822 -
Lapu9g00997 871 SMART Lactamase_B_5a 89 286 IPR001279 -
Lapu9g00997 871 SUPERFAMILY Metallo-hydrolase/oxidoreductase 77 491 IPR036866 -
Lapu9g00997 871 Pfam Metallo-beta-lactamase superfamily 90 234 IPR001279 -
Lapu9g00997 871 MobiDBLite consensus disorder prediction 25 40 - -
Lapu9g00997 871 CDD GT1 778 843 - -
Lapu9g00997 871 Gene3D - 780 840 - -
Lapu9g00997 871 ProSiteProfiles Myb-like domain profile. 772 836 IPR001005 -
Lapu9g00997 871 Gene3D - 278 428 IPR042173 -
Lapu9g00997 871 MobiDBLite consensus disorder prediction 672 686 - -
Lapu9g00997 871 PANTHER RIBONUCLEASE J 1 871 - -
Lapu9g00997 871 Pfam Zn-dependent metallo-hydrolase RNA specificity domain 434 471 IPR011108 -
Lapu9g00997 871 CDD RNaseJ_MBL-fold 80 491 - -
Lapu9g00997 871 MobiDBLite consensus disorder prediction 730 777 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g00997 Lapu-Chr9 15918358 15930202 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu9g00997 779 865 Trihelix Transcription Factor Family AT2G38250 34.831 1.90e-10 61.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Lapu9g00997 Lactamase_B 7.6e-09 CL0381
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g00997 - - gmx:100783850 1508.04
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu9g00997 9 15918358 15930202 Lapu9g00997 9 15918358 15930202 ECH