Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g00996 AGGGTTTCATTTTCAAGCAAATATAAAGAGACTATCTTTCTCTCACACTCACAATCCCTGTCTCTGGTTTGTGCTGCCTTCGTTTGCCTTTCTCGCACTGAAGAATTAACATACGTAGCAAGCATGGCAGTCACATTCTACGACCTTAGCTCTGCCTCTGGGTTGAAGAAGCTTGACGAGTACCTTCTCCCACGCAGTTACATCACCGGGTACCAAGCTTCAAAGGATGATCTCACTGTCTATGCAGCTTTGCCATCTGCTCCATCAGCTGAGTATGTGAATGTGTCCAGGTGGTACAAGCACATTGATGCTTTGTTGAGAATCTCTGGTGTTTCTGGGGAGGGGTCTGGTGTCACTGTTGAGGGATCTCTTGTTGCTGAGCCTGTTGCAACGCCCCCAGCTGCTGATACAAAGGCTGCTGCCGCTGAGGATGACGATGACGATGACGTCGATTTGTTTGGTGAAGAGACAGAGGAAGAAAAGAAGGCAGCTGAGGAACGGGCAGCTGCAGTGAAGGCATCTGGAAAAAAGAAAGAGTCTGGGAAATCATCTGTTCTGTTGGATGTGAAACCATGGGACGATGAAACCGACATGAAGAAGCTCGAGGAAGCAGTGAGATCTGTTAGCATGGAAGGGTTGCTTTGGGGTGCATCCAAACTTGTTCCCGTTGGGTACGGCATCAAGAAACTGCAAATTATGCTTACAATCGTGGATGACCTAGTTTCTGTCGACAGTCTTATTGAGGAAAATCTCACAGTTGAGCCCATCAATGAATATGTCCAGAGTTGTGACATTGTGGCCTTCAATAAAATTTAA 816 0.4681 RVSFSSKYKETIFLSHSQSLSLVCAAFVCLSRTEELTYVASMAVTFYDLSSASGLKKLDEYLLPRSYITGYQASKDDLTVYAALPSAPSAEYVNVSRWYKHIDALLRISGVSGEGSGVTVEGSLVAEPVATPPAADTKAAAAEDDDDDDVDLFGEETEEEKKAAEERAAAVKASGKKKESGKSSVLLDVKPWDDETDMKKLEEAVRSVSMEGLLWGASKLVPVGYGIKKLQIMLTIVDDLVSVDSLIEENLTVEPINEYVQSCDIVAFNKI* 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g00996 271 PANTHER EF-HAND AND COILED-COIL DOMAIN-CONTAINING FAMILY MEMBER 49 271 - -
Lapu9g00996 271 SMART EF1_GNE_2 182 271 IPR014038 GO:0003746|GO:0006414
Lapu9g00996 271 ProSitePatterns Elongation factor 1 beta/beta'/delta chain signature 2. 260 271 IPR001326 GO:0003746|GO:0005853|GO:0006414
Lapu9g00996 271 Pfam EF-1 guanine nucleotide exchange domain 184 271 IPR014038 GO:0003746|GO:0006414
Lapu9g00996 271 ProSitePatterns Elongation factor 1 beta/beta'/delta chain signature 1. 146 154 IPR001326 GO:0003746|GO:0005853|GO:0006414
Lapu9g00996 271 SUPERFAMILY eEF-1beta-like 179 271 IPR036219 -
Lapu9g00996 271 SUPERFAMILY GST C-terminal domain-like 33 108 IPR036282 -
Lapu9g00996 271 Gene3D - 30 119 - -
Lapu9g00996 271 MobiDBLite consensus disorder prediction 127 150 - -
Lapu9g00996 271 CDD EF1B 180 271 IPR014038 GO:0003746|GO:0006414
Lapu9g00996 271 Coils Coil 154 174 - -
Lapu9g00996 271 Gene3D - 175 271 IPR014717 -
Lapu9g00996 271 FunFam Elongation factor 1-beta 1 like 176 271 - -
Lapu9g00996 271 FunFam Elongation factor 1-delta 1 44 119 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g00996 Lapu-Chr9 15880304 15883084 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu9g00996 46 271 Eukaryotic Initiation Factors Gene Family AT2G18110 81.140 5.82e-115 328
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g00996 K03232 - gmx:100777627 344.739