Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g00994 ATGGGGTTTCATGACTTTGTTTTGCTATTCTGTTCAGTTTGGTGTGTCTTTTTTGTGGGTAGTTGCAGCGCTCAGTTGCAGTCCTCTCAGACCCAAGTGCTTCTCCAGTTGAAAAAGCACTTGGAGTACCCAAGACAGTTGGAAATATGGAGAGATCGTTGGACAGATCTTTGCTCTATTTCTTCTTCTGGGCAAGTGAATGTCACATGTAAGGACAATTTTGTCACTGAGCTCTCCATCCTGGGTGATAAGCCAATCAAGGTTAGAGATTTTGATGGGTTTGCCATTCCAAATCAAACACTATCAGATAGCTTCTCCATGGACTCTTTTGTGGCTACTCTGGCAAGGTTAACTAGCCTGAGAGTCCTTAGTCTTGTCTCTTTGGGCATGTGGGGACCACTCCCTGATAGAATTCACAGACTCTATGCACTTGAACGTTTGGACTTGAGTTCCAATTATCTTTATGGATCAATCCCTCCAAAGATTTGCACAATGGTGAACCTTCAAACTCTTGGATTGGGGGATAACTTCTTCAATGGTACCATCCCAAACTTGTTCAATTCGTCAAGCAATCTCTCAGTTCTTAGTTTGAGGAATAACAGGTTGAAGGGACCATTTCCACCTTCAATCCTTACTATAACCACTTTAAAAGACATTGACATCTCAAGCAATCAAATATCAGGGATCTTGGAAGATTTTAGTCCTTTGAGTAGCTTGGAACAGATAGATTTAAGAGAGAACAGATTAGAGTCTTTCTTGCCAGCAATGCCGAAAGGGTTGATTAGTCTTTTCCTCAGCAGAAATTCCTTCTCAGGTGAAATTCCCAAGCGCTATGGTCAACTTAACAGGCTTCAGAAGCTTGATGTTTCCTTCAATGCACTCACTGGCACTGCTCCTGCTGAACTTTTCTCTTTGCCAAACATCAGTTACTTGAATTTGGCTTCCAACATGTTGAATGGACCACTGCAAAGTCACCTAAGATGTAGCAGCCAACTTAGATTTGTTGACGTATCATACAATAGGTTAGTGGGGGACTTACCTTCTTCACTGAGCACTAAATCAGAAAATAGAGTTGTTAAGATTGATGGAAATTGTTTATCTGGGAGTGTGCAGCATCAGCATGCAGTATCCTACTGCACAGAAGCTCATGTGAAGAAGAAATCATACAGAGTTGGAATTTTTGTTGGTGTCATTGTAGGAATTCTTTTAATCTCTGTGGTTTTGGCTTTGACCATTGTTATAACTTGTGAGAAGTTTTTCCTTCGAGGGGTGTCGGAGCAGCATCTATTGCATAAAACAGTTCAAGATAGCAGCAATATAGCAGGATTCTCCTCTGAGCTCGTCACAAATGCAAGGTATATTTCTGAAACTGCAAAGTTAGGCAGAGAGGACCTTCCCACATGTAGGTCATATTCTTTGGAAGAGCTAAAGGAAGCAACAAATAACTTTGATAACTCTACTTTTATGGGTGAAAATATATATGGGAAGCTTTACAGAGGAAAACTGGAGAGTGGGATACCGATTGTAGTAAGGTCCTTGCCTTTGTCAAAAAAGTATTCAATTAGGAATTTCAAACTGAGGTTGGATTTGCTTGCAAAGCTCCGTCACCCTCATTTGGTATCCCTCCTAGGTCACTGCATTGATGGTGTTGTAGGAGAGAATAATGAGACAAATGTCTTTCTCATTTATGAATATGTGCCAAATGGGACTTTTCAAACTTATCTCTCTGGAGTTAGTCCTGGCAAGGTTTTCAACTGGTCAGAGCGATTGTCAGTACTAATTAACATTGCTAAGGCTGTCCACTTCCTACACACTGGTATGATACCTGGTTTCTTCAAAAATCGACTCAAGACGGATAATATCTTGCTGAATGAGAATTGGATGGCAAAGTTGAGTGATTATGGGTTGTCCATTATATCTGAAGAAACTGATGCATCTGGGGTAAAAGGAGAAAGTCCTAATTCGTGGCAAATGAAAATGTTGGAGGATGATGTTTATAGCTTTGGATTCATTCTACTGGAGGCACTTGTTGGACCTTCAGTATCAGCTGCAAGAGAAGCAACAGTGCTGAATGTAATGGCATCTTTCAATAGTCAGGATGGCTGGAAACAGATTGTGGACCCAGTTGTGCAAGCTACTTGCTCAAAAGAATCTCTTCTTGTTGTGATTTCCATAACAAATAAATGTATATCTCCTGAGTCATGGAACCGACCATCCATTGAGGATGTCCTTTGGAACCTTCAGTATGCTTCTCAAATTCAGGCAACAGCTGTTGGGGATCAGAGAATTTGA 2292 0.4092 MGFHDFVLLFCSVWCVFFVGSCSAQLQSSQTQVLLQLKKHLEYPRQLEIWRDRWTDLCSISSSGQVNVTCKDNFVTELSILGDKPIKVRDFDGFAIPNQTLSDSFSMDSFVATLARLTSLRVLSLVSLGMWGPLPDRIHRLYALERLDLSSNYLYGSIPPKICTMVNLQTLGLGDNFFNGTIPNLFNSSSNLSVLSLRNNRLKGPFPPSILTITTLKDIDISSNQISGILEDFSPLSSLEQIDLRENRLESFLPAMPKGLISLFLSRNSFSGEIPKRYGQLNRLQKLDVSFNALTGTAPAELFSLPNISYLNLASNMLNGPLQSHLRCSSQLRFVDVSYNRLVGDLPSSLSTKSENRVVKIDGNCLSGSVQHQHAVSYCTEAHVKKKSYRVGIFVGVIVGILLISVVLALTIVITCEKFFLRGVSEQHLLHKTVQDSSNIAGFSSELVTNARYISETAKLGREDLPTCRSYSLEELKEATNNFDNSTFMGENIYGKLYRGKLESGIPIVVRSLPLSKKYSIRNFKLRLDLLAKLRHPHLVSLLGHCIDGVVGENNETNVFLIYEYVPNGTFQTYLSGVSPGKVFNWSERLSVLINIAKAVHFLHTGMIPGFFKNRLKTDNILLNENWMAKLSDYGLSIISEETDASGVKGESPNSWQMKMLEDDVYSFGFILLEALVGPSVSAAREATVLNVMASFNSQDGWKQIVDPVVQATCSKESLLVVISITNKCISPESWNRPSIEDVLWNLQYASQIQATAVGDQRI* 764
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g00994 763 SMART LRR_typ_2 236 259 IPR003591 -
Lapu9g00994 763 SMART LRR_typ_2 281 305 IPR003591 -
Lapu9g00994 763 SMART LRR_typ_2 141 165 IPR003591 -
Lapu9g00994 763 ProSiteProfiles Protein kinase domain profile. 483 750 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu9g00994 763 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 446 565 - -
Lapu9g00994 763 Gene3D Ribonuclease Inhibitor 27 259 IPR032675 -
Lapu9g00994 763 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 260 384 - -
Lapu9g00994 763 Gene3D Phosphorylase Kinase; domain 1 446 565 - -
Lapu9g00994 763 Pfam Protein tyrosine and serine/threonine kinase 489 744 IPR001245 GO:0004672|GO:0006468
Lapu9g00994 763 Pfam Leucine rich repeat 190 249 IPR001611 GO:0005515
Lapu9g00994 763 Pfam Leucine rich repeat 283 342 IPR001611 GO:0005515
Lapu9g00994 763 SUPERFAMILY L domain-like 29 371 - -
Lapu9g00994 763 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 566 763 - -
Lapu9g00994 763 SUPERFAMILY Protein kinase-like (PK-like) 466 748 IPR011009 -
Lapu9g00994 763 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 98 748 - -
Lapu9g00994 763 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 27 258 - -
Lapu9g00994 763 Gene3D Ribonuclease Inhibitor 260 394 IPR032675 -
Lapu9g00994 763 Gene3D Transferase(Phosphotransferase) domain 1 566 761 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g00994 Lapu-Chr9 15821519 15827039 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu9g00994 8 695 Miscellaneous Gene Families AT5G14210 51.571 0.0 663
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-1 Lapu9g00994 PK_Tyr_Ser-Thr 4.6e-20 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g00994 - - gmx:100802978 1283.47