Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g00992 ATGGCCACCCAAAATCAATCACACTCGTGTCCAAACACAACCATCGACCCAAACAGCGGTTTCTGTTCTTCTTCTAGAACCTTCCATAGCCTCCGTCCAAACGTCTCCCTCCCTCCGCCCTCTCAGCCGCTCTCCCTCACCGATTACGCCCTCTCCCTCCTCCCTGACGCCGCCACCGCCACCGATACCTCCGCCCTCATCGACGCTGCCACCGGCCGCCACCTCTCCTACTCTCTCTTCCTCCGCCAAATAAAATCCCTCGCCTCCTCCCTCCAATCTCTCACCCCTCTCTCCAAAGGCCACGTGGCACTAATCCTCACCCCAACCTCTCTACACGTCCCCGTACTCTACTTCTCTCTCCTCTCGCTTGGAGTCACAATCGCGCCTGCTAACCCGCTCAGTTCTTCTTCCGAGTTGACTCACCTCGTACGACTCACTAAACCCACCATCGCCTTCGCCACCTCCGCCGTCGCCAAAAACATCCCGGCCCTCAAATTCGGCACCATTCTCACTGACTCCCCGCTCTTCCTCTCCATGCTCGATGCCAACGGAGACTCACACTCACGCGCTTCCGGAGTCGAACTGAGTCAGTCCGAGTCCGCCGCGATTCTCTTCTCCTCCGGCACCACGGGGCGCGTGAAGGGCGTGTTGCTCACGCACCGGAACTTCATCGCAGTCATAGGTGGGTTCATTCACCTGAGGAACATCGTGCTGCGCGATGCAGACGAAGCGGAGCCGCATCCTGTGTCACTGTTCACGCTTCCTCTGTTCCACGTGTTTGGGTTCTTCATGCTGGTTAGGTCCATCGCTATGGGGGAGACGCTCGTTCTGATGCAGAGGTTCGATTTCGAAGGGATGCTCAAAGCCGTGGAGAGATATAAAGTCTCAATGATGCCGGTATCGCCGCCGCTCGTGGTGGCCCTCGCCAAGTCGGAGCTCGTGAACAAGTACGACCTCAGCTCGCTCCGGATTCTCGGCTGCGGCGGCGCGCCGCTCGGCAAACAGGTCGCCGATGACTTCAAAGCCAAATTCCCCGACGTGGAAATTTCCCAGGGCTATGGTCTGACTGAAAGTGGAGGAGGGGCAGCTAGAACATTGGGGCCTGACGAGTATAAGTGCCATGGTTCTGTGGGTCGACTATCAGAAAACATGGAGGCCAAGATAGTGGACCCTGTAACTGGAGAGGCATTACCTCCTTGCCAAAAAGGGGAACTGTGGATTCGAGGTCCAACAATCATGAAAGGTTATGTAGGAGATGAGAAGGCGACTGCTGGAACATTGGATTCAGAGGGATGGCTGAAGACAGGCGATCTTTGTTATTTTGACTCTGATGGTTTCCTCTACATTGTAGACAGACTGAAGGAATTGATCAAATACAAAGCTTATCAGGTTCCCCCTGCTGAATTGGAACACATACTTCACACCAATCCTGAAATTGCTGATTCTGCAGTTATTCCGTATGGATCTAATCCTTTAATCTTGTATCCTGATGAAGAAGCAGGACAGATTCCTATGGCCTTTGTAGTAAGAAAACCTGGAAGCAACATCACTGCAGATCAGATCATGGAGTTTGTGGCAAAGCAGGTTTCTCCTTACAAGAAGATAAGGCGTGTTTCTTTTGTGAATTCTATCCCAAAATCTCCGGCTGGCAAAATTTTGAGAAGAGAATTAGTTGATTATGCTCTATCCAGTGGTTCATCCAAATTGTGA 1710 0.5287 MATQNQSHSCPNTTIDPNSGFCSSSRTFHSLRPNVSLPPPSQPLSLTDYALSLLPDAATATDTSALIDAATGRHLSYSLFLRQIKSLASSLQSLTPLSKGHVALILTPTSLHVPVLYFSLLSLGVTIAPANPLSSSSELTHLVRLTKPTIAFATSAVAKNIPALKFGTILTDSPLFLSMLDANGDSHSRASGVELSQSESAAILFSSGTTGRVKGVLLTHRNFIAVIGGFIHLRNIVLRDADEAEPHPVSLFTLPLFHVFGFFMLVRSIAMGETLVLMQRFDFEGMLKAVERYKVSMMPVSPPLVVALAKSELVNKYDLSSLRILGCGGAPLGKQVADDFKAKFPDVEISQGYGLTESGGGAARTLGPDEYKCHGSVGRLSENMEAKIVDPVTGEALPPCQKGELWIRGPTIMKGYVGDEKATAGTLDSEGWLKTGDLCYFDSDGFLYIVDRLKELIKYKAYQVPPAELEHILHTNPEIADSAVIPYGSNPLILYPDEEAGQIPMAFVVRKPGSNITADQIMEFVAKQVSPYKKIRRVSFVNSIPKSPAGKILRRELVDYALSSGSSKL* 570
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g00992 569 ProSitePatterns Putative AMP-binding domain signature. 203 214 IPR020845 -
Lapu9g00992 569 Pfam AMP-binding enzyme C-terminal domain 468 551 IPR025110 -
Lapu9g00992 569 Gene3D - 30 454 IPR042099 -
Lapu9g00992 569 Pfam AMP-binding enzyme 57 459 IPR000873 -
Lapu9g00992 569 SUPERFAMILY Acetyl-CoA synthetase-like 57 562 - -
Lapu9g00992 569 FunFam 4-coumarate--CoA ligase 2 455 564 - -
Lapu9g00992 569 CDD 4CL 38 557 - -
Lapu9g00992 569 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 21 559 - -
Lapu9g00992 569 Gene3D - 455 563 IPR045851 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g00992 Lapu-Chr9 15782239 15788854 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu9g00992 15 569 Monolignol Biosynthesis Gene Families AT5G63380 60.000 0.0 676
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g00992 K01904 - gmx:100777435 916.761