Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g00978 ATGGAGAAACACCAAGTGATGCTCCCTACTGCATCTACATCATCAACAGCTTTATCATCTCATTTTGACATTCCTTATGATTCTGCTGTTCATGTTGAGAAAGAGGATTTTATATCTCAAGTGACGGAGATATCGTCTCAGAACCAAAGTGACAAGGAAGTTAAGCAGCATCGATATGCATTTCAAACAAGGAGTCCTGTTGATGTTCTGGATGATGGGTACCAGTGGAGAAAATATGGGAAAAAGATAGTGAAAAACAATAGTTTCCCAAGAAGTTACTACAGGTGTGCTCATCGAGGGTGCAATGTTAAGAAACAAATCCAGCGTCATTCCCAAGATGAACAGATCGTGGTCACAACCTACGAAGGGACACATACACACCCTGTGGATAAGTCAGCGGAAACCTTCGACCAGATCTTGGGCAACCTACTCGTAAGCAACCTACTCAATAATATGCCTCCCACGTTTGAATAG 474 0.4219 MEKHQVMLPTASTSSTALSSHFDIPYDSAVHVEKEDFISQVTEISSQNQSDKEVKQHRYAFQTRSPVDVLDDGYQWRKYGKKIVKNNSFPRSYYRCAHRGCNVKKQIQRHSQDEQIVVTTYEGTHTHPVDKSAETFDQILGNLLVSNLLNNMPPTFE* 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g00978 157 Pfam WRKY DNA -binding domain 71 128 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lapu9g00978 157 FunFam WRKY transcription factor 57 56 130 - -
Lapu9g00978 157 SUPERFAMILY WRKY DNA-binding domain 62 129 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lapu9g00978 157 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 37 132 IPR044810 GO:0003700
Lapu9g00978 157 ProSiteProfiles WRKY domain profile. 65 130 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lapu9g00978 157 SMART WRKY_cls 70 129 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lapu9g00978 157 Gene3D WRKY domain 47 130 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g00978 Lapu-Chr9 15327383 15329052 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu9g00978 58 145 WRKY Transcription Factor Family AT5G13080 67.045 2.92e-44 141
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lapu9g00978 WRKY 5.2e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g00978 - - vum:124842421 230.72