Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g00953 ATGGCCAAAACGGAGATGTCAAGAACTGAACTGAACGTAAAGCAAGGAGAACCAACACGAGTTCAGCCTGCAGAGGAAACAGAAAAGGGACCCTACTTCCTTTCAAACCTTGACCAGAACATTGCTGTACCAGTGCGCACGGTTTATTGCTTCAAATCTGCTTTCAGAGGAAACGAGGATGCTACACAAGTTATCAAGGATTCCTTGTCCAAGATTCTTGTCCCTTATTACCCCATGGCAGGCACGTTGAGTATAAGCTCGGAAGGGAAGTTGATAGTGCATAATCCTGGGGAGGGTGCAGTGTTTGTTGAGGCTGAAGCAAATTGTGACATCGAAGAGATAGGAGACTTGACAAAACCAGACCCTCATACTCTTGGGAAACTGATTTACAATGTTCCTGGTGCTCGAAACATTCTTGAGATGCCTCTTATGACTGTTCAGGTGACAAAGTTCAAATGCGGAGGATTTACTTTGGGGCTTTGCATGAACCACTGCATGAAAGATGGACTATGTGCCATGGAGTTTGTGAATGCATGGAGTGAGACAGCTCGAGGTTTAGGCTTAAAGATCCCACCATTTCTTGATCGAACCATAATCCAAGCACGTGACCCTCCTAAAGTAGAGTTCAAACACAACGAATTTGCTGAAATAGAAGATGTATCAAACACTAAAAAGCTTTACGAGGAAGAAAACATGCTCTACAGATCCTTCTTCTTCGATCCTGAGAAGCTCGATCTACTAAAGAAAAAGGCCACAGAAGACGGGGTTTTGAGCAGGTGCTCCACTTTTGAAGCACTCTCAGCGTTTGTATGGAGATCTCGAACTGCAGCATTGAGGATGCAACCTGAACAACAAACAAAGCTTCTCTTCGCTGTTGATGGAAGGTCAAGATTCGTTCCCCCAATACCAGAAGGGTACTTTGGCAATGCTATTGTGTTGACAAATTCGTTGTGTGAGGCTGGGGAGTTATTGAAGAACCCTTTTTCATATTCCGTGGGATTGATTCGCAAGGCAATTGACATGGTCACAGATAGTTACATGAGATCTGCCATTGACTATTTTGAAGTCACAAGAGCCAGGCCTTCTCTAACAGCCACCCTTTTGATCACAACTTGGACTAAGTTGTCTTTCCACACCACAGACTTTGGGTGGGGTGAACCCCTATGTTCCGGCCCTGTCACCCTGCCAGAGAAAGAAGTCATTTTGTTCTTCTCACATGGTCGAGAAAGGAAAAGCATAAATGTTCTTCTGGGTTTGCCTAAGTCTGCCATGGAAATTTTTGAAGCATTGATGATGCAGGTGTGA 1305 0.4452 MAKTEMSRTELNVKQGEPTRVQPAEETEKGPYFLSNLDQNIAVPVRTVYCFKSAFRGNEDATQVIKDSLSKILVPYYPMAGTLSISSEGKLIVHNPGEGAVFVEAEANCDIEEIGDLTKPDPHTLGKLIYNVPGARNILEMPLMTVQVTKFKCGGFTLGLCMNHCMKDGLCAMEFVNAWSETARGLGLKIPPFLDRTIIQARDPPKVEFKHNEFAEIEDVSNTKKLYEEENMLYRSFFFDPEKLDLLKKKATEDGVLSRCSTFEALSAFVWRSRTAALRMQPEQQTKLLFAVDGRSRFVPPIPEGYFGNAIVLTNSLCEAGELLKNPFSYSVGLIRKAIDMVTDSYMRSAIDYFEVTRARPSLTATLLITTWTKLSFHTTDFGWGEPLCSGPVTLPEKEVILFFSHGRERKSINVLLGLPKSAMEIFEALMMQV* 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g00953 434 Gene3D - 215 434 IPR023213 -
Lapu9g00953 434 FunFam Spermidine hydroxycinnamoyl transferase 11 214 - -
Lapu9g00953 434 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 20 429 - -
Lapu9g00953 434 MobiDBLite consensus disorder prediction 1 27 - -
Lapu9g00953 434 Pfam Transferase family 16 429 - -
Lapu9g00953 434 Gene3D - 7 214 IPR023213 -
Lapu9g00953 434 FunFam Tryptamine hydroxycinnamoyl transferase 218 432 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g00953 Lapu-Chr9 14848025 14850414 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu9g00953 10 434 Monolignol Biosynthesis Gene Families AT5G48930 36.281 2.15e-88 274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g00953 K15400 - gmx:100794490 775.007