Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g00937 ATGGAAAGGCTAAATTTTATAAAAAATGGAGTGAGTAGATTGCCTCCTGGTTTTCGTTTCCAGCCAACAGACGAAGAACTCGTGTTTCAGTACTTGAAATCTAAGATCTTCTCCTCCCAGTTGCCTGCTTCGATTATTCCTGAGATCAATGTCAGCAAGAATGATCCCTGGGATTTGCCAGGAAATTGTGATGATGAACAAGAGAGGTACTTTTTCAGCTCCAAGGAAGCCAAATATCGAAACGGAAATCGCATGAACCGAACAACCAACTCTGGCTATTGGAAGGCAACAGGATCAGACAAAAAGGTTTTATCGTCAATAAATAATGGCATTGCAGGGTTAAGAAAAACTCTGGTATTTTATGAAGGAAAATCTCCAAATGGGTCTAGAACTGAATGGGTCATGCATGAATATCGACTCCTCAGTGTGGAAACTAGTGCTTCCAAATCACCCCAGAACTACTCAAACGAGATAGGGGATTGGGTTCTGTGTCGCATATTCATGAAGAAAAGAAGCATAGAAAGTGATAACAACACTACTCCTCCCAGGAAGAACAACAATGCAGTGACGAATAATATTGAGGTGGCTGAGCCGAGATTCTTTGAGTTTTTTAGTGTTCATCACAATTCAGTTCCAGCTCCTATACATTCTTCTACATTCTCATCGTGTTCAAGTTCCAATAACGTTGAAGATGTCTCTTCTCCTAACCACGAAGAAACAAGTGGCTATGCACATTTTTAA 741 0.4049 MERLNFIKNGVSRLPPGFRFQPTDEELVFQYLKSKIFSSQLPASIIPEINVSKNDPWDLPGNCDDEQERYFFSSKEAKYRNGNRMNRTTNSGYWKATGSDKKVLSSINNGIAGLRKTLVFYEGKSPNGSRTEWVMHEYRLLSVETSASKSPQNYSNEIGDWVLCRIFMKKRSIESDNNTTPPRKNNNAVTNNIEVAEPRFFEFFSVHHNSVPAPIHSSTFSSCSSSNNVEDVSSPNHEETSGYAHF* 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g00937 246 Gene3D NAC domain 23 174 IPR036093 GO:0003677|GO:0006355
Lapu9g00937 246 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 13 217 - -
Lapu9g00937 246 MobiDBLite consensus disorder prediction 224 240 - -
Lapu9g00937 246 Pfam No apical meristem (NAM) protein 15 140 IPR003441 GO:0003677|GO:0006355
Lapu9g00937 246 SUPERFAMILY NAC domain 11 169 IPR036093 GO:0003677|GO:0006355
Lapu9g00937 246 ProSiteProfiles NAC domain profile. 14 169 IPR003441 GO:0003677|GO:0006355
Lapu9g00937 246 MobiDBLite consensus disorder prediction 224 246 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g00937 Lapu-Chr9 14392031 14393544 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu9g00937 1 172 NAC Transcription Factor Family AT5G13180 65.116 2.36e-76 229
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lapu9g00937 NAM 8.6e-35 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g00937 - - gmx:100527806 401.749