Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g00931 ATGAAAGATTCAGCGGAAACAGATCCTATCGCTGACTCTCTCAACCTTCTCACTACTCTCCTCGACTCCGACCTACCCACCGTCACAAACTTCAGAGGGAAATGGTCACTCGCCCGACTCAAACTCACCCACCTCCAAACTCACCTCACCGATTTCTCCGCCGAGTTCCCCAACGCTTCCACCACCAACCCCCTCTCCCTCCACCTTCTCCACTCCATCTCCCACACGCTCCACGACGCCGTTTTACTCGCCCGCACCTGCCAGCCCCAAGACCTCCCCAACGGCAAGCTCAAAACCCAAAGCGACCTTGACTCCCTCCTTGCTACTCTGGACCGCCACGTCACCGACTGCGACATCCTCTTCCGCAGCGGTCTTCTCCTCGAAAACGCCGCCGTTTCCACCTCCTCCAAAAGAGAAGCCATCCGCTCCGCTTCGCGAAACCTAATCACCCGGTTGCAAATCGGGTCGCCCGAGTCCAAAACCTCCGCCATGGACTCGCTATTGGGCCTCCTTCACGAAGACGACAAGAATGTTACCATTGCCGTGGCCCAGGGCGTCGTTCCCGTGCTCGTGCGCCTACTCGATTCCCCCTCCGACATGAAGGAGAAAACCGTCGCCGCCATCGCCAAAGTCTCCACCGTTGAAAGTGCCAAGACCGTTCTCCTCGCCGAGGGTTTGCTCCTGCTCAACCACCTTCTCCGAGTGCTGGATTCTGGTAGCGGATTCGCGATTGAGAAAGCATGCATCGCGCTTCGAGCGCTGAGTCTCGCCAAGGACAACGCCAGAGCGATTGGCTCGCGCGGCGGAATCTCGTCTCTGCTGGAGATCTGCCAGGCTGGCACCCCTGGCGCGCAGGCCTCTGCCGCCGCCGTGTTGCGAAACCTCGCCGCGTTCGTTGAGATTAGGGACAATTTCGCCGAAGAGAATGCGGTGGTGGTTTTAATCGCCTTGGCTTCCTCTGGGACTGCTTCGGCGCGTGAAAATGCGATTGGGTGTTTGTCGAATTTGATTTCCGAGGCTGAGTCGGACGGTTTGTCGAATTTGAGGGTTATGGTGGTTAAAGAAGGTGGGGTTGAGTGTTTGAAGAATTACTGGGACTCGGGTACTCCAATTCCGAGTCTTGAAGTTGCAGTGACGATGTTGCGGCATTTGGGTGAGAGTGCTGCAGTTGGAGAGGTTCTGATAGGTGAAGGGTTTGTTCAGAGGCTTGTGGGGGTGCTGAACTGTGAGGTGCTGGCGGTGAGGATTGCCGCGGCGAGGGCGGTTCACGCTTTAGGGTTGAACTGTGGCAGGGCTAGGAAGGAGATGGGGGAATTGGGGTGCGTTTTGGGTTTGATTAAGATGTTGGATGGAAAAGGTGTAGAGGAGAAAGAGGTTTCTGCAATGGCATTGTCGGTGCTGCTGATGCACCCTGCGAATAGGAGGGTTTTCCGCAAGGATGAAAGAGGGGTTGTGAGTGCGGTTCATTTGTTGAACCCTTCGTTGCAAGGGTTGGATAAGAAGTACCCTGTTTCGTTGCTCGCTTCATTAGTGCATTCCAAGAGTTGCAGAAAGCAGATGGTAGCAGCAGGGGCTTGTGTATATATGCAGAAGCTTGTGGAGATGGATGTGCCGGGATCAAAGAAACTCTTGGAGAGTCTTGGGCGTGGTAAGATTTGGGGTGTTTTTTCTAGACCCTAG 1680 0.5536 MKDSAETDPIADSLNLLTTLLDSDLPTVTNFRGKWSLARLKLTHLQTHLTDFSAEFPNASTTNPLSLHLLHSISHTLHDAVLLARTCQPQDLPNGKLKTQSDLDSLLATLDRHVTDCDILFRSGLLLENAAVSTSSKREAIRSASRNLITRLQIGSPESKTSAMDSLLGLLHEDDKNVTIAVAQGVVPVLVRLLDSPSDMKEKTVAAIAKVSTVESAKTVLLAEGLLLLNHLLRVLDSGSGFAIEKACIALRALSLAKDNARAIGSRGGISSLLEICQAGTPGAQASAAAVLRNLAAFVEIRDNFAEENAVVVLIALASSGTASARENAIGCLSNLISEAESDGLSNLRVMVVKEGGVECLKNYWDSGTPIPSLEVAVTMLRHLGESAAVGEVLIGEGFVQRLVGVLNCEVLAVRIAAARAVHALGLNCGRARKEMGELGCVLGLIKMLDGKGVEEKEVSAMALSVLLMHPANRRVFRKDERGVVSAVHLLNPSLQGLDKKYPVSLLASLVHSKSCRKQMVAAGACVYMQKLVEMDVPGSKKLLESLGRGKIWGVFSRP* 560
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g00931 559 Gene3D - 133 371 IPR011989 -
Lapu9g00931 559 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 185 226 IPR000225 GO:0005515
Lapu9g00931 559 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 15 557 - -
Lapu9g00931 559 Gene3D - 372 547 IPR011989 -
Lapu9g00931 559 SMART arm_5 257 297 IPR000225 GO:0005515
Lapu9g00931 559 SMART arm_5 387 427 IPR000225 GO:0005515
Lapu9g00931 559 SMART arm_5 174 213 IPR000225 GO:0005515
Lapu9g00931 559 SMART arm_5 298 338 IPR000225 GO:0005515
Lapu9g00931 559 SUPERFAMILY ARM repeat 147 492 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu9g00931 Lapu-Chr9 14299129 14301260 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu9g00931 143 298 U-box Gene Family AT1G23030 30.573 1.38e-11 65.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g00931 - - vum:124844092 949.118