Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu9g00884 ATGTCGAGTTTCCAAGTCGGCGGCAAGGTGGTGGACCGCGTCGATTTGCTCAGGAAGAAGCAACTGCCGTGGCGCCTCGACGTTTGGCCTTTCGCGATTCTATACGGCGCGTGGGTTTCGGTGATTCTTCCCAGCCTCGACTTTGTGGATGCAGCGATCGTTTTAGGTGCGCTCCTTGCGCTTCACATCCTCGTTTGGCTGTTCACTGGTTGGTCTGTTGATTTCAAATGTTTCGCTCACTATGGCAAGGCTAAAAATATTGACCAGGCTGATTCCTGCAAGATTACTCCGGCTAAGTTCTCGGGTTCTAAAGAAGTTGTGCCGCTGCATTCTCGGAAAAGTTCTGCAGGTTCTTCATCAGCTGTGGATTTGGAAGAGAACTACTTCGATTTTAGAAAACAATGTTTTGTGTATTCAAAGGAGAAGGGAACTTTTTGCAAGCTTTCCTACCCTACCAAAGAAACATTTGGATATTACATCAAATGCAGTGGCCATGGCTCTGAAGCTAAAGTTCTTGCAGCAACTGAGAAATGGGGACGCAATGTATTTGATTATCCTCAGCCAACATTTCAGAAATTGATGAAAGAGCACTGCATGGAGCCTTTTTTCGTATTTCAGGTTTTTTGTGTGGGTCTCTGGTGTTTGGATGAATATTGGTATTACAGTTTGTTTACTCTATTTATGCTTTTTATGTTCGAGTCAACCATGGCAAAAAGTAGGTTGAAAACTCTAACTGAGTTACGACGTGTTAGAGTGGATAGTCAGATCCTAATGGTACATCGCTCTGGCAAGTGGGTAAAACTCTCTGGTACAGAGCTTTTGCCAGGGGATGTTGTCTCCATAGGCCGCTCTTCTAGTCAGAACGGGGAGGAGAAGTCTGTACCAGCAGACATGCTCATTTTGGCTGGAAGTGCGATTGTGAATGAAGCTATTCTCACAGGCGAGTCTACTCCTCAATGGAAGATTTCAATTGCGGGTAGGGGTATGGAGGAGAAATTGTCAGCAAAACGAGATAAAAGCCATGTTTTATTTGGTGGAACAAAAATATTGCAGCACACTCCGGATAAGAGTTTTCCTCTTAAAACGCCTGATGGTGGCTGCTTGGCTGTTGTCCTGAGAACTGGGTTTGAAACAAGTCAAGGAAAGTTGATGCGAACAATCTTATTCTCTACAGAAAGGGTGACGGCTAATAGCTGGGAAAGTGGATTTTTCATTTTATTCTTGGTTGTGTTTGCTCTAATTGCTGCTGGTTATGTGCTTGTTAAGGGGTTAGAAGATCCTACAAGGAGCAAGTATAAACTAATACTAAGTTGCTCACTTATTGTTACTTCTGTGATACCTCCTGAGTTACCAATGGAATTATCAATAGCTGTTAATACTTCTCTTATTGCACTGGCACGCCGTGGGATTTTTTGCACAGAGCCTTTTCGGATACCATTTGCTGGAAAGGTTGATATATGTTGTTTTGACAAGACAGGGACACTTACATCTGATGATATGGAATTTTCTGGAGTTGTTGGGTTGAATGGAACTACAGATTTGGAATCTGATACTAGTAAAGTGCCTGTGCGAACTGTAGAAATCCTTGCTTCTTGCCATGCATTGGTATTTGTTGAGAATAAGCTGGTTGGTGATCCTCTCGAAAAGGCTGCACTGAAGGGAATTGACTGGAGTTATAAATCTGATGACAAGGCTCTACCAAAGAAGGGAAATGGCCATCCTGTCCAAATTGTTCATCGGTACCATTTTTCATCTCATCTAAAACGAATGGCAGTTGTTGTTCGCATTCAGGATGATTTTTTCTCTTTTGTGAAGAACCTCCAGAAAGCAGTTTGTTTTATGTTTCAATGTTTTGAATACCATCTGAGTTCTTTAAAGTTTTTCTTTATAATACTATCTGTGCTGCTGCTCTGTTTATTAATATTTTTTCATTTTGACAAGGAATTAATTGTAAAAAACTCTTCTGACCTTTTATTTCAGGGTGCCCCAGAAGTTATACAAGATAGGCTCGTCAGTGAAGCAAGAAGCATGGATAGAGATATAGTGGAGAGTGGACTAACTTTTGCAGGTTTTGTGGTATTTAATTGTCCCATAAGATCAGATTCAGCCACTGTTTTATCTGAATTAAAAGAATCTTCACATGACTTGGTGATGATTACCGGTGACCAAGCTTTGACAGCTTGCCATGTTGCTAGCCAAGTTCATATTATATCAAAACCTACATTAATCCTTGGACCAGCACGAAATGGTGAGGGATATAATTGGATGTCCCCGGACGAGACTGAAAACATTCGCTACAGTGAGAAAGAGGTTGAATCTTTATCGGAGACCCATGATCTCTGTATTGGAGGTGATTGCATTGAGATGTTGCAACAGACATCAGCACATCTTCTGGTCATTCCTCATGTGAAGGTTTTTGCCAGAGTTGCTCCCGAGCAAAAAGAACTTATCATGACCACTTTCAAAACAGTTGGACGGTTAACTTTGATGTGTGGGGATGGAACCAATGATGTTGGAGCTTTGAAGCAGGCTCATGTGGGAATCGCTCTTCTGAATGCAATTCCTCCTACTCAAAGTGGAAACTCCTCTTCAGATTCGTCCAAGGAAGAAGGCTCAAAATCTGTTACCCAAAAGAAATCTAAGTCTGCACTGGACACATCTGGAAAGAGTGCTGGTGAAGGTACTTCCAAATCCAAAGTTGCTTCAAAATCAGACTCCTCTAGCCACTCATCTGGTAACCGTCACCAAGCAGCTGTCGAGATGCAACGGCAGAAGCTTAAGAAGATGATTGATGAGCTTAATGAGGAAGGAGATGGTCGTGCACCCATTGTCAAGCTTGGCGATGCCTCGATGGCATCTCCATTCACTGCTAAGCATGCATCTGTTGCTCCTACCACTGACATAATTCGTCAAGGTCGAAGTACCCTCGTGACAACACTCCAAATGTTTAAAATTCTGGGTCTCAACTGTCTTGCTACTGCATATGTGTTGAGTGTTATGTATCTGGATGGTGTGAAGCTAGGTGACGTACAAGCCACAATAAGTGGTGTATTCACTGCTGCATTTTTCCTCTTCATCTCACATGCACGCCCTCTTCCCAATCTTTCTGCTGAACGTCCTCACCCCAACATCTTCTGTGCTTACGTTTTCCTTTCCCTTTTGGGACAATTTTCTATTCACCTGCTTTTCCTGATTTCATCTGTGAAAGAAGCTGAAAAATACATGCCAGATGAATGCATTGAACCTGATGCTGATTTTCACCCTAATCTGGTGAACACTGTTTCCTATATGGTGAGCATGATGCTTCAGGTGGCCACATTCGCTGTGAACTATATGGGTCATCCCTTCAACCAGAGTATTTCTGAAAACAGACCGTTCCGGTATGCACTCGTTGCTGCTGTTATTTTCTTTACCGTGATTACATCTGATCTCTTCAGGGACTTGAATGACTGGTTGAAGTTAGTACCATTGCCAGTGGGATTAAGGGATAAACTATTGATTTGGGCGTTTCTAATGTTTTTGGTTTGCTATTCGTGGGAGAGACTGTTGAGATGGGCCTTCCCTGGTAAGATCCCTGCTTGGAAGAGGAGACAACGGCTTGCTGTATCTAATTTAGATAAGAAGAAACAGGTCTAA 3636 0.426 MSSFQVGGKVVDRVDLLRKKQLPWRLDVWPFAILYGAWVSVILPSLDFVDAAIVLGALLALHILVWLFTGWSVDFKCFAHYGKAKNIDQADSCKITPAKFSGSKEVVPLHSRKSSAGSSSAVDLEENYFDFRKQCFVYSKEKGTFCKLSYPTKETFGYYIKCSGHGSEAKVLAATEKWGRNVFDYPQPTFQKLMKEHCMEPFFVFQVFCVGLWCLDEYWYYSLFTLFMLFMFESTMAKSRLKTLTELRRVRVDSQILMVHRSGKWVKLSGTELLPGDVVSIGRSSSQNGEEKSVPADMLILAGSAIVNEAILTGESTPQWKISIAGRGMEEKLSAKRDKSHVLFGGTKILQHTPDKSFPLKTPDGGCLAVVLRTGFETSQGKLMRTILFSTERVTANSWESGFFILFLVVFALIAAGYVLVKGLEDPTRSKYKLILSCSLIVTSVIPPELPMELSIAVNTSLIALARRGIFCTEPFRIPFAGKVDICCFDKTGTLTSDDMEFSGVVGLNGTTDLESDTSKVPVRTVEILASCHALVFVENKLVGDPLEKAALKGIDWSYKSDDKALPKKGNGHPVQIVHRYHFSSHLKRMAVVVRIQDDFFSFVKNLQKAVCFMFQCFEYHLSSLKFFFIILSVLLLCLLIFFHFDKELIVKNSSDLLFQGAPEVIQDRLVSEARSMDRDIVESGLTFAGFVVFNCPIRSDSATVLSELKESSHDLVMITGDQALTACHVASQVHIISKPTLILGPARNGEGYNWMSPDETENIRYSEKEVESLSETHDLCIGGDCIEMLQQTSAHLLVIPHVKVFARVAPEQKELIMTTFKTVGRLTLMCGDGTNDVGALKQAHVGIALLNAIPPTQSGNSSSDSSKEEGSKSVTQKKSKSALDTSGKSAGEGTSKSKVASKSDSSSHSSGNRHQAAVEMQRQKLKKMIDELNEEGDGRAPIVKLGDASMASPFTAKHASVAPTTDIIRQGRSTLVTTLQMFKILGLNCLATAYVLSVMYLDGVKLGDVQATISGVFTAAFFLFISHARPLPNLSAERPHPNIFCAYVFLSLLGQFSIHLLFLISSVKEAEKYMPDECIEPDADFHPNLVNTVSYMVSMMLQVATFAVNYMGHPFNQSISENRPFRYALVAAVIFFTVITSDLFRDLNDWLKLVPLPVGLRDKLLIWAFLMFLVCYSWERLLRWAFPGKIPAWKRRQRLAVSNLDKKKQV* 1212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu9g00884 1211 Gene3D - 686 867 IPR023214 -
Lapu9g00884 1211 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 494 700 IPR023299 GO:0000166
Lapu9g00884 1211 Gene3D - 225 388 - -
Lapu9g00884 1211 FunFam Cation-transporting ATPase 226 388 - -
Lapu9g00884 1211 SFLD p-type atpase 469 974 IPR044492 -
Lapu9g00884 1211 SUPERFAMILY Calcium ATPase, transduction domain A 255 387 IPR008250 -
Lapu9g00884 1211 MobiDBLite consensus disorder prediction 854 870 - -
Lapu9g00884 1211 PANTHER CATION-TRANSPORTING ATPASE-RELATED 12 670 IPR006544 GO:0006812|GO:0016020|GO:0019829|GO:0140358
Lapu9g00884 1211 NCBIfam P-type ATPase of unknown pump specificity (type V) 44 605 IPR006544 GO:0006812|GO:0016020|GO:0019829|GO:0140358
Lapu9g00884 1211 MobiDBLite consensus disorder prediction 877 918 - -
Lapu9g00884 1211 Pfam E1-E2 ATPase 258 468 - -
Lapu9g00884 1211 SUPERFAMILY HAD-like 681 855 IPR036412 -
Lapu9g00884 1211 ProSitePatterns Hypothetical cof family signature 2. 831 853 - -
Lapu9g00884 1211 SUPERFAMILY Calcium ATPase, transmembrane domain M 167 1188 IPR023298 -
Lapu9g00884 1211 MobiDBLite consensus disorder prediction 854 921 - -
Lapu9g00884 1211 PRINTS P-type cation-transporting ATPase superfamily signature 308 322 - -
Lapu9g00884 1211 PRINTS P-type cation-transporting ATPase superfamily signature 831 850 - -
Lapu9g00884 1211 PRINTS P-type cation-transporting ATPase superfamily signature 488 502 - -
Lapu9g00884 1211 PRINTS P-type cation-transporting ATPase superfamily signature 712 722 - -
Lapu9g00884 1211 FunFam Cation-transporting ATPase 691 866 - -
Lapu9g00884 1211 Coils Coil 916 936 - -
Lapu9g00884 1211 CDD P-type_ATPase_cation 170 1126 IPR047820 -
Lapu9g00884 1211 ProSitePatterns E1-E2 ATPases phosphorylation site. 490 496 IPR018303 -
Lapu9g00884 1211 Gene3D - 496 684 IPR023299 GO:0000166
Lapu9g00884 1211 SFLD Haloacid Dehalogenase 469 974 - -
Lapu9g00884 1211 NCBIfam HAD-IC family P-type ATPase 403 512 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu9g00884 1 1211 Primary Pumps ATPases AT5G23630 73.917 0.0 1829
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu9g00884 K14950 - gmx:100789385 2140.93
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu9g00884 9 13221888 13239999 Lapu9g00884 9 13221888 13239999 ECH